Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g01209 ATGGCTACCATCATTTTAAGGTCAAATGAAGTGCTTCATGCCTTGCTCTTGTTCTGTCTCTTCCTGATGCTGCACAACTGTAGTGCCTATGAATTCATTGTTGGAGGCCAAAAGGGTTGGAGTGTGCCTAGTGACCCCAATTCTAACCCTTATAGTCAATGGGCACAAAAGAGCAGATTTCAAATAGGAGACTCCTTAGTGTTCAATTACCCTTCTGGAAAAGACTCAGTGATTCAAGTAAGCAGCAAAGACTATGACAGTTGCAACACTGATGCATACGCTGAAAAATTCTCAGACGGCCACACAGTCATCAAGCTCAGCCAATCAGGGCCTCACTACTTCATCAGTGGAAACAAAAACAACTGTCTCAAAAATGAGAAACTGGTGGTGATTGTGCTGGCTGACAGGAACAACAAAAATACATACACTAACCAAACAAGTCCTTCACCTTCTCCTTCTCAGTTTACAACACAATCAGTAGCTCCATCCCCAGCACCTTCTCAGCAACAGGTTCCATCTCCAGTGGCAGCACCTCCTCCGCAAGAGGCTGCTTCTCCACCATCTCCACCCTCTAACCAAACACCAGCTCCAGCTCCTGTTACTGATCAGCCTTCTCCTCCTTCTCCTCCTCACAATGCTGCTTCCTCAATCCTGGTCAGTTTTGCTGGTTCTGTTGGAGCATTATTCATGGCCTCAGTTCTGTTTTTCTCTTTGTAA 717 0.4561 MATIILRSNEVLHALLLFCLFLMLHNCSAYEFIVGGQKGWSVPSDPNSNPYSQWAQKSRFQIGDSLVFNYPSGKDSVIQVSSKDYDSCNTDAYAEKFSDGHTVIKLSQSGPHYFISGNKNNCLKNEKLVVIVLADRNNKNTYTNQTSPSPSPSQFTTQSVAPSPAPSQQQVPSPVAAPPPQEAASPPSPPSNQTPAPAPVTDQPSPPSPPHNAASSILVSFAGSVGALFMASVLFFSL 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g01209 238 CDD OsENODL1_like 30 133 IPR041846 -
Vimu4g01209 238 ProSiteProfiles Phytocyanin domain profile. 30 134 IPR003245 GO:0009055
Vimu4g01209 238 MobiDBLite consensus disorder prediction 167 211 - -
Vimu4g01209 238 MobiDBLite consensus disorder prediction 140 214 - -
Vimu4g01209 238 MobiDBLite consensus disorder prediction 140 166 - -
Vimu4g01209 238 Pfam Plastocyanin-like domain 40 124 IPR003245 GO:0009055
Vimu4g01209 238 Gene3D - 30 146 IPR008972 -
Vimu4g01209 238 FunFam Early nodulin-like protein 9 30 144 - -
Vimu4g01209 238 SUPERFAMILY Cupredoxins 29 133 IPR008972 -
Vimu4g01209 238 PANTHER BLUE COPPER PROTEIN 29 162 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g01209 Vimu-Chr4 10963923 10965476 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu4g01209 11 236 Phytocyanin Superfamily AT3G20570 46.696 1.07e-51 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g01209 - - gmx:100788637 279.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g01209 4 10963923 10965476 Vimu4g01209 4 10963923 10965476 ECH