Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vimu4g01185 | ATGGCCTCTATGCCGCTGGGGCCGCAGCAACAGCTTCAACCACCGCAAGTGGCAACTCCGCCGCAACAACTGCCGCAGGCGGAGAATGACCCTATGCAAGTGGACTCTCGCGGCGGCTCTGACGCCGCCTCCAATAAGGTAATTTCTGCTCTCGGCCATTTCCTCACTGTGCGCAACGGCGCCGTTTATGGTCCTCGGATCGTCATTGATCCGCTGGACATGCCTCCGGACGAACGCAGCTTACTGCGATCTGCTCGTTTCCGGCATTGGTTTTTCTCGCTTGGAGGTCGCCGGAATTTTTATAACGTTGCCTTCAAGGAATGGCTTTTACTTTTTTGGCTTGTGGAATTGGAAATTTCTGTTGAAAAGTTGAAGTTTGAGGAGCTTTCGGAAATGTCTGCTCCCGTCGCAGAGGGTAATGAGGCACATGGACTCACTGGTCACATAATATCAACCACAATTGGTGGCAAAAATGGTGAACCTAAACGAACTATCAGTTACATGGCCGAACGTGTTGTTGGCACTGGATCATTTGGAATTGTTTTCCAGGCAAAGTGCTTGGAGACCGGGGAGGCAGTGGCCATAAAGAAGGTCTTGCAGGACAGGCGATACAAAAATCGGGAACTGCAGTTAATGCGCATGATGGATCACCCAAATGTAGTTTCCCTGAGGCACTGTTTCTTCTCTACAACAAGTCGAGATGAACTTTTTCTGAACTTGGTGATGGAATATGTCCCTGAGACGATCTTCCGTGTTATAAAGCACTACAGTAGTATAAACCAGAGAATTCCCCTGATCTATGTGAAATTATATACATATCAAATCTTTAGGGGACTGGCATATATCCACACCGTACCAGGAGTCTGCCACAGGGATGTAAAGCCTCAAAATCTTTTGGTGGATCCACTCACACATCAAGTCAAGCTTTGCGATTTTGGGAGTGCAAAAGTTCTGGTGAAGGGTGAATCAAACATCTCATACATATGTTCACGGTACTATCGTGCTCCAGAACTAATATTTGGTGCGACAGAATACACAACTTCTATTGATATCTGGTCAGCTGGTTGTGTCCTTGCTGAACTTCTCCTGGGTCAGCCTTTGTTCCCGGGAGAAAATCAGGTCGACCAACTTGTTGAAATTATCAAGGTTCTTGGCACTCCTACTCGAGAAGAAATTCGATGCATGAACCCTAATTATACAGATTTCAGATTCCCCCACATCAAAGCTCATCCTTGGCACAAGGTTTTTCACAAGCGAATGCCTCCTGAAGCAATTGACCTTGCATCAAGGCTTCTCCAATATTCACCAAAACTTCGTTACAGCGCAGTGGAAGCATTGGCACATCCTTTCTTTGACGAGCTTCGCGAGCCCAATGCTCGACTACCAAATGGTCGTTCATTGCCTCCACTTTTTAACTTCAAACAGGAATTAGATGGAGCTCCTCCTGAACTTCTTCCTAAGCTCATCCCGGAGCATGCCAGACGGCAAACCGGTTTTGGCTTGCCGGACACCCAAACTCAAATGTAA | 1527 | 0.4722 | MASMPLGPQQQLQPPQVATPPQQLPQAENDPMQVDSRGGSDAASNKVISALGHFLTVRNGAVYGPRIVIDPLDMPPDERSLLRSARFRHWFFSLGGRRNFYNVAFKEWLLLFWLVELEISVEKLKFEELSEMSAPVAEGNEAHGLTGHIISTTIGGKNGEPKRTISYMAERVVGTGSFGIVFQAKCLETGEAVAIKKVLQDRRYKNRELQLMRMMDHPNVVSLRHCFFSTTSRDELFLNLVMEYVPETIFRVIKHYSSINQRIPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGESNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENQVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPHIKAHPWHKVFHKRMPPEAIDLASRLLQYSPKLRYSAVEALAHPFFDELREPNARLPNGRSLPPLFNFKQELDGAPPELLPKLIPEHARRQTGFGLPDTQTQM | 508 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vimu4g01185 | 508 | ProSiteProfiles | Protein kinase domain profile. | 167 | 451 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vimu4g01185 | 508 | Gene3D | Phosphorylase Kinase; domain 1 | 152 | 246 | - | - | |
Vimu4g01185 | 508 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 288 | 300 | IPR008271 | GO:0004672|GO:0006468 | |
Vimu4g01185 | 508 | FunFam | Glycogen synthase kinase-3 beta | 151 | 246 | - | - | |
Vimu4g01185 | 508 | ProSitePatterns | Protein kinases ATP-binding region signature. | 173 | 197 | IPR017441 | GO:0005524 | |
Vimu4g01185 | 508 | MobiDBLite | consensus disorder prediction | 1 | 41 | - | - | |
Vimu4g01185 | 508 | Pfam | Protein kinase domain | 167 | 451 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vimu4g01185 | 508 | SUPERFAMILY | Protein kinase-like (PK-like) | 166 | 474 | IPR011009 | - | |
Vimu4g01185 | 508 | FunFam | Shaggy-related protein kinase kappa | 247 | 494 | - | - | |
Vimu4g01185 | 508 | SMART | serkin_6 | 167 | 451 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vimu4g01185 | 508 | PANTHER | GLYCOGEN SYNTHASE KINASE-3 ALPHA | 131 | 496 | - | - | |
Vimu4g01185 | 508 | CDD | STKc_GSK3 | 162 | 454 | IPR039192 | - | |
Vimu4g01185 | 508 | Gene3D | Transferase(Phosphotransferase) domain 1 | 247 | 494 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vimu4g01185 | Vimu-Chr4 | 10617466 | 10622147 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vimu4g01185 | 171 | 481 | MAP Kinase Gene Family | AT3G59790 | 36.503 | 5.97e-57 | 192 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CMGC_GSK | Vimu4g01185 | Pkinase | 9.1e-64 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vimu4g01185 | K14502 | - | gmx:100788319 | 721.85 |