Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g01171 ATGTATACCCTTCTACGTGGCAATATTTTAAACAATAAAAATATTGTTTATTGTATACCCTTCGTTGCGTCCAATTTTCTTCTTCCTCTACATCTCCACCAATATTGGTGCCGCTGCTTGCCACACCTCCTCCGTCGCTGCTCTTCGCCTCCAACGGTGGAGGGTTTGAGAGAGAGAGGAAGGTTATTGGGTTTGGCTCCAACGGGCTTGCCCGTTGGCATTAAATCTTCATCGTCTTCAAAGAGTGCTCCTGAAGCTGAAAGGTGGGGGTACTGTTTCTTTTCTTCTTCTCATAGACTTGCCGCCGCCTCTAAGCCCTCAACCTTTGGTGGGCTCACGGTCCAACAAATTCTGGCCAATAATTGGAACATTCTGGACGAAACCAAGTGGAAAAAATTGAAGGTGAGGTTGGATATTCCAACGATGTACAAGAAGATTTCCCGGAGAGATTACCAGTTCCCTGACTGGATATCAAAACCGGCACGCTATGTTATATATAAATTACTGGATCTGAACCCAGAAACAAGAATGGATTTGGAGGCTTTGTTTGGGAACCTGTGGTTCAAGAAATCATTGAATATAACAAGGTTGTTCGAAACAACGTTGGATGGGGGTAGTAAGAGGGAGAAGAGATTCACTTCGAGTGCTTGCGTGGAGGTGGTGGAGGAGAAGCTTAAGGAAGTAGGTGGGATTTTGGGGTTTAAGGTGGAGGCAGGGAAAACCATTAATGGTGTAAGAGGTGGTCGCCGACGACGGTGTGGCAGCGATCTAAGTGGCGCGGCGGGAACAATGCAGTGA 798 0.4662 MYTLLRGNILNNKNIVYCIPFVASNFLLPLHLHQYWCRCLPHLLRRCSSPPTVEGLRERGRLLGLAPTGLPVGIKSSSSSKSAPEAERWGYCFFSSSHRLAAASKPSTFGGLTVQQILANNWNILDETKWKKLKVRLDIPTMYKKISRRDYQFPDWISKPARYVIYKLLDLNPETRMDLEALFGNLWFKKSLNITRLFETTLDGGSKREKRFTSSACVEVVEEKLKEVGGILGFKVEAGKTINGVRGGRRRRCGSDLSGAAGTMQ 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g01171 265 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 138 240 - -
Vimu4g01171 265 SUPERFAMILY Protein kinase-like (PK-like) 133 195 IPR011009 -
Vimu4g01171 265 Gene3D Transferase(Phosphotransferase) domain 1 130 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g01171 Vimu-Chr4 10452955 10454045 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu4g01171 138 251 CBL-interacting serine-threonine protein kinases AT4G14580 40.541 7.17e-25 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g01171 K12761 - gmx:100784173 146.362