Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g01166 ATGGAGGAGACACGAGAAGATGCAGGGCCGACAGAGCAAGGGCCATCTAATGTGTCGTGGTGGCCTTCAGATTTTGTTGAAAACTTTGGATCTGTTTCTTTGGATTCTCATGATGAGGCACTAAGTAATAAAGAATCTCCTCATGTTGTCAAAGATGTTTTGTCTTCTCAGAAAGCATCACAAACTCTCTGGCGCACTGGGATGCTTTCAGAACCCATACCAAATGGTTTTTACTCTGTTGTTCCGGTTTTGTTCTTAGCGGAGCTGAAGTTACAATCTGCATATTATTGTTTAACTGAACATTTACATGTGGAAACAAGACTAAAGGAACTTTTTGATAATATTCCTTCCTTGGACGAGCTTAATGCTTTGAGTGGAGAGGGTTTTAAGACTGATGTCATTCTCGTGGATTCAGAGAAAGATAAAAAGTTATCCATGTTGAAGCAATTGATTGTGGCATTAGTTAAAGGATTAAACTCAAATCCGGCTGCCATAATTAAGAAGATAGCTGGATTGGTTTCTGATTTTTATAAGCGTCCCAATGTTGAAAGTCCAGCAAAAGCTGTGCTAGATGAAACCTCTCACATGTTAGAGAATCGAGGAGTCCAGATGCTGGGGCAAATAAAGCACGGTTCTTGCCGTCCTCGAGCAATCTTATTTAAAGTATTAGCTGATACTGTCGGTCTTGAAAGTAGACTTGTACTGGGCTTGCCAAATGATGGAGTTACTGAATGTCAAGACTCGTACAAGCATATGTCTCTGATAGTTGTATTAAATTCTGTGGAAATGCTGGTTGATCTTATGCGTTTTCCAGGCCAATTGTTACCACGATCAACCAAGGCAGTTTTTATGACTCACATTTCTGGTGCAGGAGAGAGTGATTCAGCAGAAAATGATTCTTGTGATTCACCATTAGAACCGAACAGCCCTTTATTTGGGGTTTCAGAGAGGTTAGATCCTAACAAGCTTAAGAACTGGAACCGAACGGTGGAAGATGGGGAGAGACTAGGCCGAACGGTAGAAGGCAGGGAGCGACCAAGCCGAATGGTGGAAGACGGGGAGCAATCAGGCCAAACGGTGGAAGGCAGAGAACGATCAGGCCGGGCAGTGGACAACGGGGACCGAGCAGGCCGAATGGTGGAAAGTGAGGAGCGAACAGGACGAACGGCTGTGAGGAGTCAAGCCAAACGGTTGAAGGATTACCATCCTAATTGTCGTAGTGTTACGTTGCCTACTCGGATACGTAACAATTGGTCCGACCTGTCGGATCGTCAGAGAGGAGAAAAAGCTGGAGAACATGGAATTGTCCATGAGGAGATTGGAGATGGAAATGGCGGCAGTCTGCAAGGATTTGCAAGAACTGCTGAGGATGATGGGAGGGCGAGCTCGACAATTAGATGGAAATTTGGATGGAAGCCAGAGAAAAAGGAGGACCAACGAGAGGAAGAGGAGGGCGAGAGAGAGGATGGATGCCACGAGGAGCAACCAAATTGGAGGAAAAGGGTAGAGTTACCCATTTTTGACGGGGTTGATCCGGTGTCAAAGGAAGAGAAGTTGTGCCTAGCCTACATCAGTATGGAGGAAAAGGGCGGTTACTGGTTCAGATTTTGGAAGGGGAACCCAAAAAATCGTTCTTGGGAAGTTTTAAAGGAGGCGATGGTGATCCGATTCGTAGAAAGAAACACCGGGTTAGTCTTCGAAAGACTGGTGCCAAGTAAGCAGTCGGGGATCGTGGAAGAATACGTCCAAGCTCTGAACGAGAAGGGACCGCTGGAACCGAACGGTGGCGAACTGATGAATTCGAATGCGAGAGGATTGCCAGAACCGAACGGTAACAGACTGAAGAATTTGAACGTGAGAGAATTGCTAGAATCGAACAGTAGCAGACTGTTGGATCTGAACGTGAGAGAACGAGTGAAACCAAAAGAGAGAGGACCTACCGAGCCGAACGGGAGAGGACGACCAGAACCGAACGTGAGAAAACTTACTGGAAAGAACAATGAAAGTTTAGGAAGGAAGAGCAGATGGAAGAATCAATGCCTTGGAGAGAACAATGGATTCTGTGAAGAGTTTTTGATAGCAAAAGGGAGAGAGCAACGTGAAGTACTAAAAGACATTGAAGACCATTTCCTCAAGGCTTATGATTTGGGAAAAATGGTGAACAGAATGCTGGACAAAGAATGGAAGACATTGGAGGAGGTGTTACCACCACCCAAACCTCCAGACCTCAATTGGAGGGCAACAACCAGTGAGTACCCTTCATATGATAACACAATGATGAGGAGAAGCCAGGAGATCAAGTTTCATAGTTCCAACCTTGAGGACAAGGTTGTTTTGCAGCGGGGTGTAATGTTATGGTATAAGGTGGTTGGTGACCGAACGATGGAAGATGGGGAGAGACCAGGCCGAACGGTAGAAGACAGGGAGCGACCAAGCCGAATGGTGGAAGGCGGGGAGAGATCAGGCCGAACGGTGGAAGTGGACAACGGGGAGCGAGCAGGCCGAACGGTGCAAGGCGAGGAACGAACAGGCCGAATGGTAAACAACGGGGAGCGAGCAGGCCGAACGGTGGTAGGTTCTGAGGAGTCAAGCTGA 2595 0.4678 MEETREDAGPTEQGPSNVSWWPSDFVENFGSVSLDSHDEALSNKESPHVVKDVLSSQKASQTLWRTGMLSEPIPNGFYSVVPVLFLAELKLQSAYYCLTEHLHVETRLKELFDNIPSLDELNALSGEGFKTDVILVDSEKDKKLSMLKQLIVALVKGLNSNPAAIIKKIAGLVSDFYKRPNVESPAKAVLDETSHMLENRGVQMLGQIKHGSCRPRAILFKVLADTVGLESRLVLGLPNDGVTECQDSYKHMSLIVVLNSVEMLVDLMRFPGQLLPRSTKAVFMTHISGAGESDSAENDSCDSPLEPNSPLFGVSERLDPNKLKNWNRTVEDGERLGRTVEGRERPSRMVEDGEQSGQTVEGRERSGRAVDNGDRAGRMVESEERTGRTAVRSQAKRLKDYHPNCRSVTLPTRIRNNWSDLSDRQRGEKAGEHGIVHEEIGDGNGGSLQGFARTAEDDGRASSTIRWKFGWKPEKKEDQREEEEGEREDGCHEEQPNWRKRVELPIFDGVDPVSKEEKLCLAYISMEEKGGYWFRFWKGNPKNRSWEVLKEAMVIRFVERNTGLVFERLVPSKQSGIVEEYVQALNEKGPLEPNGGELMNSNARGLPEPNGNRLKNLNVRELLESNSSRLLDLNVRERVKPKERGPTEPNGRGRPEPNVRKLTGKNNESLGRKSRWKNQCLGENNGFCEEFLIAKGREQREVLKDIEDHFLKAYDLGKMVNRMLDKEWKTLEEVLPPPKPPDLNWRATTSEYPSYDNTMMRRSQEIKFHSSNLEDKVVLQRGVMLWYKVVGDRTMEDGERPGRTVEDRERPSRMVEGGERSGRTVEVDNGERAGRTVQGEERTGRMVNNGERAGRTVVGSEESS 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g01166 864 MobiDBLite consensus disorder prediction 634 671 - -
Vimu4g01166 864 MobiDBLite consensus disorder prediction 795 864 - -
Vimu4g01166 864 Pfam Ethylene-responsive protein kinase Le-CTR1 56 274 - -
Vimu4g01166 864 MobiDBLite consensus disorder prediction 471 495 - -
Vimu4g01166 864 MobiDBLite consensus disorder prediction 291 317 - -
Vimu4g01166 864 PANTHER ARMADILLO REPEAT-CONTAINING PROTEIN 3 204 295 - -
Vimu4g01166 864 MobiDBLite consensus disorder prediction 334 392 - -
Vimu4g01166 864 MobiDBLite consensus disorder prediction 795 839 - -
Vimu4g01166 864 MobiDBLite consensus disorder prediction 291 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g01166 Vimu-Chr4 10375963 10382521 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu4g01166 1 319 MAP Kinase Kinase Kinase AT3G58640 63.750 2.29e-128 403
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g01166 - - vum:124836254 580.867