Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g01158 ATGGTGAATGAAAGGTTATGCAATGGAGGAAAAAGAGTAGAAGAAGAAGAAGATGTTAGGTACAACGCGGCGAGATATGATTGGTCGGAAGATGTTATCGAAGGTTTAGAGGGATACGTGGAGTTCACTCAGTGGCTGGAAATCCAGTTTGGTTTCCGCACTCACACACCTTATCGTGCTCCAGAGTCACCAACCTCTGCCAGGAAGAATCGCAGAGAGAGGGTCAGAGTGAGAAATAGAGTGAGAAGCAGCGAGAGTAGATCGGCCATGGCTTCCTCCAAGGATCGTGACAACTTCGTCTACATCGCCAAGCTCGCGGAACAGGCCGAACGATACGAAGGTTTGAAGTTCTTCCTTTGTTTCTTGGACTCTGACTCGCGCATGCGCGTCGATTTTATATCGTTTTTAGTGAGAAAAATCATTTTTGGTAGTCAATTTGGTTTACTAATCACTGTTCACTGTGAGTTTGGTTGCGAGGGGAAGTGGAGGATGGTGGATTCGATGAAGAAGGTTGCGAATCTAGACGTTGAACTTACTGTTGAGGAGCGAAATTTGCTTTCTGTTGGATACAAGAATGTGATTGGTGCTCGGAGGGCGTCATGGAGGATCCTGTCTTCCATAGAGCAGAAGGAAGAGACAAAAGGGAATGAATTGAATGCGAAGCGAATTAAGGAGTACAGACAGAAGGTTGAATTGGAGCTTTCGAACATCTGTAATGATGTTATGAGGGTGATTGATGAACATCTTATTCCTTCGGCTGCAGCTGGTGAATCCACTGTGTTTTACTATAAGATGAAAGGAGATTACTATCGTTATCTTGCTGAATTTAAGACCGGCAATGAGAAGAAGGAAGCTGCTGATCAGTCTATGAAAGCATATGAGGCGTCTTCTGTTGTTGTATTGGGGAAAAGTGGGAACTCTTCTGATTTGAACGCTTCTGCTACTACTGCAGCCGAGTCTGATTTACCACCCACACACCCCATCCGATTGGGTCTAGCTTTAAATTTCTCAGTCTTCTATTATGAAATCTTGAATTCCCCAGAAAGAGCTTGTCATCTTGCGAAGCAAGCTTTTGATGAAGCTATTTCTGAGCTGGACACCCTGAACGAGGAGTCATACAAAGATAGCACCTTAATCATGCAACTTCTTAGAGACAATCTAACTTTGTGGACTTCTGACATCCCTGAGGATGGAGAAGATGCGCAAAAAGTGAATGGCACTGCCAAACTTGGTGGAGGTGAGGATGCAGAGGATTTGATGCATGCATTTGGGAATGAAACATGA 1284 0.4439 MVNERLCNGGKRVEEEEDVRYNAARYDWSEDVIEGLEGYVEFTQWLEIQFGFRTHTPYRAPESPTSARKNRRERVRVRNRVRSSESRSAMASSKDRDNFVYIAKLAEQAERYEGLKFFLCFLDSDSRMRVDFISFLVRKIIFGSQFGLLITVHCEFGCEGKWRMVDSMKKVANLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEETKGNELNAKRIKEYRQKVELELSNICNDVMRVIDEHLIPSAAAGESTVFYYKMKGDYYRYLAEFKTGNEKKEAADQSMKAYEASSVVVLGKSGNSSDLNASATTAAESDLPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDGEDAQKVNGTAKLGGGEDAEDLMHAFGNET 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g01158 427 Gene3D - 74 405 IPR036815 -
Vimu4g01158 427 Coils Coil 351 371 - -
Vimu4g01158 427 ProSitePatterns 14-3-3 proteins signature 2. 373 392 IPR023409 -
Vimu4g01158 427 PRINTS 14-3-3 protein zeta signature 177 206 IPR000308 -
Vimu4g01158 427 PRINTS 14-3-3 protein zeta signature 257 279 IPR000308 -
Vimu4g01158 427 PRINTS 14-3-3 protein zeta signature 226 250 IPR000308 -
Vimu4g01158 427 SUPERFAMILY 14-3-3 protein 165 400 IPR036815 -
Vimu4g01158 427 ProSitePatterns 14-3-3 proteins signature 1. 183 193 IPR023409 -
Vimu4g01158 427 Pfam 14-3-3 protein 163 297 IPR023410 -
Vimu4g01158 427 Pfam 14-3-3 protein 310 391 IPR023410 -
Vimu4g01158 427 PANTHER 14-3-3 PROTEIN 96 394 IPR000308 -
Vimu4g01158 427 SMART 1433_4 96 404 IPR023410 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g01158 Vimu-Chr4 10198708 10203713 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu4g01158 90 417 14-3-3 family AT2G42590 65.455 1.33e-144 411
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g01158 K06630 - gmx:547990 466.463