Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g01078 ATGGCAATGGAGTACTCTAATAACGGTTTTCTTGGCCTTTTTCTCTTCTTCATATCCATCTCCATTCTATTTTCTTCACCAGCAACAGCATTCACATTATTTCAAGTTCGTTGGGTGCCCAACCCTTCAGAAGATTACACGCACTGGGCTCAGAGAAACAGGTTTCAAGTCAACGACAATCGTTTTAAGTCAAACTTACTTCTCTTTTCAACCCTAAAACACTACACAAATTATCTGTACAACGTTGTATTTGTTATCAGATTTATGTTTAAGTATAAGAGTGGGTCTGATTCAGTGTTGGTAGTAAAGAAGGAGGATTACGATTCATGCAACACTAACAACGCCATGCAAGAGATGGACGGTGGTGATTCACTGTTTACTTTTGAGAAATCGGGTCCTTTTTTCTTCATCAGTGGCAATGCTCAAAACTGCCAACGTGGTCAGAAGCTAACCGTCGTCGTTTTGGCCGTCCGACATAACAAACTCGCTCACTCGCTTTTTCCCGCAGCAACACCATCTCCGGCGGAAGCTGCAGAAAATGGGCCATCTCCAAGCTCTGATATTAGCCCATCAGACCCAACGTCTTCGGCGCCGAATCCGCCCAAACATTCGGGCGCTACGAGTTTTAGGAGTTCGGTTGGTGTCGGTCTGGGTGTTGTTAGCATTGGGGTGGGCTTGTTCTTCAGCTTATTGGGCTAG 699 0.4492 MAMEYSNNGFLGLFLFFISISILFSSPATAFTLFQVRWVPNPSEDYTHWAQRNRFQVNDNRFKSNLLLFSTLKHYTNYLYNVVFVIRFMFKYKSGSDSVLVVKKEDYDSCNTNNAMQEMDGGDSLFTFEKSGPFFFISGNAQNCQRGQKLTVVVLAVRHNKLAHSLFPAATPSPAEAAENGPSPSSDISPSDPTSSAPNPPKHSGATSFRSSVGVGLGVVSIGVGLFFSLLG 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g01078 232 PANTHER BLUE COPPER PROTEIN 38 175 IPR039391 GO:0009055
Vimu4g01078 232 Gene3D - 35 158 IPR008972 -
Vimu4g01078 232 MobiDBLite consensus disorder prediction 178 208 - -
Vimu4g01078 232 SUPERFAMILY Cupredoxins 37 155 IPR008972 -
Vimu4g01078 232 ProSiteProfiles Phytocyanin domain profile. 32 156 IPR003245 GO:0009055
Vimu4g01078 232 Pfam Plastocyanin-like domain 88 148 IPR003245 GO:0009055
Vimu4g01078 232 MobiDBLite consensus disorder prediction 171 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g01078 Vimu-Chr4 9249051 9249866 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu4g01078 13 228 Phytocyanin Superfamily AT4G28365 36.036 9.78e-39 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g01078 - - vun:114184709 278.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g01078 4 9249051 9249866 Vimu5g01404 5 24781348 24782308 PCT