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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Vimu4g01059
ATGATAGAGGAGCTATACATACTTGAAATGTCGGAGAGAAATGTTGATAAGGGAAAAAGGATCATCATCGGTGTTTCAACCTTGTTCTTGGTGGCTGTAGTTGGAGTTATCGTATTTGGTATCAACCTCGCTGAGAGTGGTTCAAATGGAAATGGTGATAAAGAGAATGTTAATAACAAAAAGGAACATGTTACTGCCTCTGTAAAAGCCGTTCAAACCCTTTGTAACCCTACGAATTACAAGGAAGAATGTGAAGAAAATCTCATGGCAGGTGTCGGAGACAGCACAACAACAGATCCATATGAACTTATCAAACTTGCTTTCAATATCACCATGGAAAAAATTACTGATAAATTCGAAGAAATGAATATCTTGCATGACATTGAGAAGGAGCCTAGAGCCAAGATGGCACTGGAAACATGCAAACAACTCATGGATCTTTCGGTTTCGGAGTTAGAAAGGTCATTTATTGGAATGAACGAGTTTAGCCTGATGAATGTTGATAAAATCCTTATGAACTTAAAAGTTTGGCTAAGTGGTGCACTTACATACCAAGACACTTGCTTGGATCAGTTTGAGAACACCACCAGCGATGCTGGTAAAAAGATGCAGGATTTATTAACGACAGGCATGCATATGACTAGCAATGGTCTTTCCATCATAACAGCATTGTCTGATACTTTCACAAATTTCAATGCCACAAAATTACTGGGACGTCGCCTCCTTCAAGATTCTGAGTCACCATCATCGGTTCATAATGGAGGACTAAATGAAACTTTGTTATTAAATCGTAAGCCTAATGTGACTGTAGCCAAAGATGGCAGTGGAGATTTCAGAACCATCAATGAAGCACTGAACAAAGTGCCCGAGAAAAATAAAACACCATTTGTGATCTACATCAAGGAAGGCATCTATCAAGAGTATGTTGAAGTGAAAAAGAATATGACTCATGTGGTTTTCATTGGTGATGGTGGAAAAAAGACAAGAATAACAGGCAATAAAAACTACATTGATGGAATCACCACTTATAAAACTGCTACAGTTGGTATGTCTTCTTTCATGTTCCTTTTCAATATCTTTGTTTAA
1086
0.3785
MIEELYILEMSERNVDKGKRIIIGVSTLFLVAVVGVIVFGINLAESGSNGNGDKENVNNKKEHVTASVKAVQTLCNPTNYKEECEENLMAGVGDSTTTDPYELIKLAFNITMEKITDKFEEMNILHDIEKEPRAKMALETCKQLMDLSVSELERSFIGMNEFSLMNVDKILMNLKVWLSGALTYQDTCLDQFENTTSDAGKKMQDLLTTGMHMTSNGLSIITALSDTFTNFNATKLLGRRLLQDSESPSSVHNGGLNETLLLNRKPNVTVAKDGSGDFRTINEALNKVPEKNKTPFVIYIKEGIYQEYVEVKKNMTHVVFIGDGGKKTRITGNKNYIDGITTYKTATVGMSSFMFLFNIFV
361
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Vimu4g01059
361
Pfam
Pectinesterase
267
356
IPR000070
GO:0030599|GO:0042545
Vimu4g01059
361
Pfam
Plant invertase/pectin methylesterase inhibitor
70
220
IPR006501
GO:0004857
Vimu4g01059
361
CDD
PMEI-like_3
73
225
-
-
Vimu4g01059
361
Gene3D
Invertase/pectin methylesterase inhibitor family protein
66
226
IPR035513
-
Vimu4g01059
361
SMART
PMEI_2
66
220
IPR006501
GO:0004857
Vimu4g01059
361
SUPERFAMILY
Plant invertase/pectin methylesterase inhibitor
70
225
IPR035513
-
Vimu4g01059
361
Gene3D
-
262
358
IPR012334
-
Vimu4g01059
361
SUPERFAMILY
Pectin lyase-like
265
352
IPR011050
-
Vimu4g01059
361
PANTHER
PECTINESTERASE
26
355
-
-
Vimu4g01059
361
FunFam
Pectinesterase
67
225
-
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Vimu4g01059
Vimu-Chr4
8939851
8940936
Dispersed/Transposed
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Vimu4g01059
17
356
Carbohydrate Esterase
AT3G05610
41.860
8.48e-90
281
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Vimu4g01059
K01051
-
gmx:100815272
463.381
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