Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g01056 ATGGCGTCTTTACCGTCGGGTCTCGCCAACGGTGCTTCCAACGGTTTTCATTTTACTTCTGGTGACATCCTTTGTTCCTACGAGGACAACAATACCAACAACTGCTCTTCTAACGGCATTTACATCGATCCCGCCAAGGATTTTCATGCATCAAGGATGGCAAAAACATCCATAGTTCCTGCTACAGCCTATAGTTCGTCTGAAGATTCTTTGAGCCAGGATGTGATTGCCACTGTTGAGAAGACTATGAGAACATGTACCGATAACCTTCTGCGGTTTCTTGAGGGAATCAGTTCAAGGCTGTCAAACTTGGAATTATATTGTTACAATCTTGACAAATCAATTGGAGCAATGCGATCTGATTTAAATAGTGATCATGAAGAGGCAGATTCAAAACTCAAATCTCTTGATAAACACCTTCAGGAAGTACGCAGGTCTGTGCAAATTTTGAGAGACAAGCAAGAGCTGGCTGAGACTCAGAAAGAATTAGCCAAGCTTCAGCTTATTCGTAAAGAATCATCTTCCTCAAGTCATGCACAGTCTAATGAGGAGAGATCTTCACCTTCTTCCATTGATCCAAGAAGAATTGATAATGCATCTGACACACAGAACCTAGATCTAGCTCTTGTCTTACCTCATCAACTTGCCCTCCGGCAACAGCCTGGGTCATCTTCCCATCAAGTGCCAGCCCCAAATGTGAGCCAAGCCACTCAACAACCTCATCATTACCTGATGCCGTCTACCCCTTCCAATCCACATCCTTGGAATCAATATTTGCCGTCTGATCCACACTATCGAATTCCACCATCAACATCATCGTCTCTGGTAACCCAATCCCCACCCAGGCAACAATTATCTCAGTATCAGCAGCTACAGCACCAAGAATTGCAATGGTCTCAACAGTTACCACAGCAGGTGGATGTGCTAACTCCACATCCACCCTCAATCCAGTCTCAAGTAAGACCCCCTGTAACCAATGTTTATACTCCTTATTCTACCAGCCAAGCTACAAATCATCTTCCGCCACGGAACAGCATGCCGACGCAACTCTCTTATTCAGGGATTCCAATTGAAGTACCCAGCCATGGTGATGTTCAACCACATGGATACAGTGGAGCTGGTGGAACAGTTCCCCAACAACCTATGCTCCAGCACATGAAGGGCTCTCTTTCAGCACAGCCAGCGGATGTGTATGGAACTAGCGGGATCTACACCACTCATCCTCCTGCTAGTTCCTTCACGGTGTATGATAGTGAGAATGCAAGATCACATTATCCGTCACAACCATCTCATACTGCTCAAGGTGGATATCCTCCAACTAGTGCTTCCCTTCACAACTCTGCACCACAGAATTTTATGGTTCAGAGCTCTAGCCAGTCACAATTTCCTCGAATCAATCCCAACAATGATCACGTGATAAGCAAGATCCAGAGGGGATGGTTAGGGTGA 1449 0.4555 MASLPSGLANGASNGFHFTSGDILCSYEDNNTNNCSSNGIYIDPAKDFHASRMAKTSIVPATAYSSSEDSLSQDVIATVEKTMRTCTDNLLRFLEGISSRLSNLELYCYNLDKSIGAMRSDLNSDHEEADSKLKSLDKHLQEVRRSVQILRDKQELAETQKELAKLQLIRKESSSSSHAQSNEERSSPSSIDPRRIDNASDTQNLDLALVLPHQLALRQQPGSSSHQVPAPNVSQATQQPHHYLMPSTPSNPHPWNQYLPSDPHYRIPPSTSSSLVTQSPPRQQLSQYQQLQHQELQWSQQLPQQVDVLTPHPPSIQSQVRPPVTNVYTPYSTSQATNHLPPRNSMPTQLSYSGIPIEVPSHGDVQPHGYSGAGGTVPQQPMLQHMKGSLSAQPADVYGTSGIYTTHPPASSFTVYDSENARSHYPSQPSHTAQGGYPPTSASLHNSAPQNFMVQSSSQSQFPRINPNNDHVISKIQRGWLG 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g01056 482 MobiDBLite consensus disorder prediction 217 257 - -
Vimu4g01056 482 MobiDBLite consensus disorder prediction 169 198 - -
Vimu4g01056 482 MobiDBLite consensus disorder prediction 266 291 - -
Vimu4g01056 482 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 10 464 - -
Vimu4g01056 482 MobiDBLite consensus disorder prediction 420 447 - -
Vimu4g01056 482 Coils Coil 126 169 - -
Vimu4g01056 482 MobiDBLite consensus disorder prediction 370 390 - -
Vimu4g01056 482 MobiDBLite consensus disorder prediction 217 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g01056 Vimu-Chr4 8904428 8907446 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu4g01056 75 243 Trihelix Transcription Factor Family AT5G14540 30.178 1.78e-18 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g01056 - - vum:124844872 788.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g01056 4 8904428 8907446 Vimu4g01056 4 8904428 8907446 ECH