Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g01031 ATGCACATTCGTGGTTCTATTGTGCCAAATCCTTGTCCTTTGTGTTCATCTTCGCTCGGGAATCTCGTCGAGAGGATTAAGCAGCTTGGTACCCTCACTGTCTCCGCCATCATTAGGAACATCTTCTCTACGATCTTGAACTTCTGTTTTGCATTAGTGGAAACTTTGTTGGGGGCCTTGACTGGAGCTTTGATAGGACAAGAAACTGAGAGTGGCTTCATTCGAGGGGCTGTTGTTGGAGCCATATCAGGAGCTGTATTTTCCACTGAAGTGTTTGAATTGTCTCTTGTTCTTTGGCAATCTGACGAGTTTACTTAG 318 0.4497 MHIRGSIVPNPCPLCSSSLGNLVERIKQLGTLTVSAIIRNIFSTILNFCFALVETLLGALTGALIGQETESGFIRGAVVGAISGAVFSTEVFELSLVLWQSDEFT 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g01031 105 PANTHER NEP1-INTERACTING PROTEIN-LIKE 2 22 103 IPR044523 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g01031 Vimu-Chr4 8719737 8720555 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu4g01031 21 103 C3H Transcription Factor Family AT5G66070 71.084 2.95e-33 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g01031 - - ccaj:109800586 152.525