Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g00986 ATGGAGTTCGCAGGGCTCGTGCGAGATGTTTCCACTGACAGGGTTCGCTTCACTGTTCTACTCAGTCTTGAACAAATTAGGAAACTAAAGAAATGGGTCTCTCTTAAAAGTGCCAGCAACGATTCGGGGTTATTACACATATCAACCTTTGTTGTGGCATGCTCTTTGATTTGGGTTTGCAAGAACAGGTTGGAAGAAAAAAAAGCCAGTTTTTCAGAAGAGTGCGATGAACTTTGCCACTTGGTGTTTCTAGCAGATTGTCGAGAGCGTCCTGAATTTTCATTACCTTCAACGTACTTTGGAAATTGTTTAACCTCTTACATTGTGGCAATAAAGAGGAGTGAGCTAGTGGGAGAAGATGGGATGGTTGCTGCGGCGAATGCTATTGGAAAGGAAATTAGAGATTTGAAGAGTGATCCTTTGAGAAATGCTGAAACGTTGATGTCAGATTATAGAGAGATAGGGAAACCAGGTAAATCTGTGTTGATTATTGCAGGTTCACCAAAATTGGGTGTGTACAAGACTGATTTTGGTTGGGGAAAGCCTAAGAAATGTGAAGCTGCTCATATTGAATCGTCAGGATCCATTTCTCTTTCTGATTGCAGAGACGAAAACGGAGGAATTGAGATTGGAATGGCACTTGAAAGAACTCAGATGAATAAGTTCACCAACATCTTAGAAAGGGAAATTCATAATATTGATAAATTTGATTGA 714 0.4034 MEFAGLVRDVSTDRVRFTVLLSLEQIRKLKKWVSLKSASNDSGLLHISTFVVACSLIWVCKNRLEEKKASFSEECDELCHLVFLADCRERPEFSLPSTYFGNCLTSYIVAIKRSELVGEDGMVAAANAIGKEIRDLKSDPLRNAETLMSDYREIGKPGKSVLIIAGSPKLGVYKTDFGWGKPKKCEAAHIESSGSISLSDCRDENGGIEIGMALERTQMNKFTNILEREIHNIDKFD 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g00986 237 Pfam Transferase family 9 224 - -
Vimu4g00986 237 Gene3D - 10 233 IPR023213 -
Vimu4g00986 237 PANTHER - 9 231 - -
Vimu4g00986 237 Coils Coil 61 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g00986 Vimu-Chr4 8285391 8286104 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu4g00986 33 226 Monolignol Biosynthesis Gene Families AT5G48930 24.880 1.16e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g00986 - - vra:106771201 377.096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g00986 4 8285391 8286104 Vimu4g00986 4 8285391 8286104 ECH