Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g00981 ATGGCAGAAGTTAGAACACATAAACTTGTTGAGAAATCTCATGTTGCTAGAGCATCACTTCCTAGTTCTACAACAAGAACAACCTCGTCTCTTCCCCTCTCATTCCTTGACTTGCCTTTAGCTGGTCCTGTTTATGTCAAACGCCAATTCTTCTATCAGTTTCCCCACTCCACACACCATTTTTGTGAAACTACACTCCCCACTCTCAAGCACTCTCTCTCTCTTATCCTTCAACACTTCTTTCCTCTAGCTGGAAATCTCCTTTGTCCTCCACCACCCCACAAGCCTTTCATTCGCTGCACTGATCATGACACTGTCCCTTTAACCATCATTGAATCCAAATCTGATTTCAATCATCTCTCATCCAACCACCCTAAGAGTCTCCATGAATTGGGTCACCTGAATCCCGAGTTGACATTCGCAACCATGCATGATGACACGTTCATTTTCCCACTAGTAGCATTGCAAGCCACGGTGTTCGAAAGCCATGGCCTTTGTATCGCCATCACGTACTGTCATGTGATGGATGGTAAGTGTTGCAATCATTTTATGAAGTCTTGGTCTTCCCTTTGTCAAAGTGGTGGAGTTGACTTGACGCTTGTAGAGAATTCACCACCGTGCTTCGATAGGGAAGTGTTGAGGGACCCCAGAGGAGAACTCGAGGACATTTTTTTGAGAGACTATTTCGAAGAGAGATCAACTTGGAAGGACAAGCTCATTGATCAAACTCCTAAACATGAGGAGTATTATAAGGCGACGATTGTTTTTGGGAGAGATGACATTGAGGGCTTAAAAAGATGGGTTCTGGCACAGTGGAAGAAAAATGACGAGTTTAACTCTCCGCAATATTTGTCAAAATTTGTGGTTGTTTGTGCTCTTGTGTGGACTAGCTTGGTTAAAACAAGATGCAAAGATGAAGATGATGAAGAAGAAAAAGAAGAATACTTTCGTTTCGCTGTAGATTGCAGAGGTCGCCTTGGTTATCCTTTGCCAGAAACATACTTTGGAAACTGCTTAGCGCTGTGTTATACCATGCTTAAGAGAAATGAGCTTAAGGGAGAGGATGGTTTTGTGAATGCGGTGAAGGTAATTGAAAAGACAGCGAGTGATATGAAAAGTGAGCCTTTTAAAGAAGCACAACATTGGAGGACTTTGTTTGTGAAAACGTTTGTGTTGGGAACTCCGTTGTTAGTTACTGGGTCACCTAACTTCGAAGTTTACGAGACTGATTTTGGATTTGGAAGGCCTACCAAAGTTGAAATGGTACATTCTTTCAAGTGCATGTCTCTAGCCGAAAGTAGAGATGAGGAAGGAGGACTTGAGGTTGGTTTGGTGTGTAAGAGTGAGGAAATGCCAACTAACAGAGACTTTGGCTGCCAGAGAGCGAACCCAGATGTCGCAGAAATGCCACGCTTATCTGACCCATCATCTCCTTCCTTGCAAAGATCAGGGGAGAAGAAATTGGTTCTCTACAGACCTGAACTAGAACCAAAAGGGGAAGGAGAAGGGTGTCTCCCTATTATGAGGTGGAAAAAGAAGGAGAAGGTCGTGACGGTGGATAGGAATAAGACGTTGGAGGAGGCGTTGAAGGTGTAG 1596 0.4373 MAEVRTHKLVEKSHVARASLPSSTTRTTSSLPLSFLDLPLAGPVYVKRQFFYQFPHSTHHFCETTLPTLKHSLSLILQHFFPLAGNLLCPPPPHKPFIRCTDHDTVPLTIIESKSDFNHLSSNHPKSLHELGHLNPELTFATMHDDTFIFPLVALQATVFESHGLCIAITYCHVMDGKCCNHFMKSWSSLCQSGGVDLTLVENSPPCFDREVLRDPRGELEDIFLRDYFEERSTWKDKLIDQTPKHEEYYKATIVFGRDDIEGLKRWVLAQWKKNDEFNSPQYLSKFVVVCALVWTSLVKTRCKDEDDEEEKEEYFRFAVDCRGRLGYPLPETYFGNCLALCYTMLKRNELKGEDGFVNAVKVIEKTASDMKSEPFKEAQHWRTLFVKTFVLGTPLLVTGSPNFEVYETDFGFGRPTKVEMVHSFKCMSLAESRDEEGGLEVGLVCKSEEMPTNRDFGCQRANPDVAEMPRLSDPSSPSLQRSGEKKLVLYRPELEPKGEGEGCLPIMRWKKKEKVVTVDRNKTLEEALKV 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g00981 531 PANTHER - 8 456 - -
Vimu4g00981 531 Gene3D - 7 239 IPR023213 -
Vimu4g00981 531 Gene3D - 247 457 IPR023213 -
Vimu4g00981 531 MobiDBLite consensus disorder prediction 466 485 - -
Vimu4g00981 531 Pfam Transferase family 21 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g00981 Vimu-Chr4 8255336 8259551 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu4g00981 22 451 Monolignol Biosynthesis Gene Families AT5G48930 23.128 1.38e-16 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g00981 - - var:108332870 868.226
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g00981 4 8255336 8259551 Vimu4g00981 4 8255336 8259551 ECH