Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g00862 ATGTCATCATCACCCCCATCTCTGGTAACGGCGGCGATTGCCGCAGATCTCCCCATCCGCCAGATTCCGGGAAGCTACGGATTCCCGTTGCTGGGCCCCTTATCGGACCGACTCGACTACTTCTGGTTCCAGAAGCCGGAGAGCTTCTTCAAGAACCGAATGGAGAAGTACAAGAGCACGGTGTTCCGCACCAATGTTCCTCCCACCTTCCCCTTCTTCGTCAACGTTAATCCCAACGTCATCGCAGTTCTCGATGTCAAATCCTTCTCCCACCTCTTCGACATCGACCTCGTCGACAAGAAGGACGTTCTCGTCGGAGACTTTGTCCCCGACGTCAGCTTCACCGGAAATATGAGGGTCGGCGTCTACCAGGACCCCTCCGAACCTCAACATTCCAAGGTGAAGGGCTACATAATAGATATCCTGAAACGAAGCTCGGGAATATGGGCATCAGAACTAGTGTCCAACCTAGACGTATTCTGGGACAACATCGAATCAACAGTCTCAAAATCTTCATCTGCGTCCTATTTATTCCCTCTGCAACAATTTCTCTTCACTTTCCTCTGCAAAGTTCTGGCAGGTGCAGACACTTCTCGTGACCCCAAAATCGCAGAGTCAGGCCATGTCATGCTTAGTCGATGGCTTGCCCTTCAGCTCATCCCCATTACCAGCATCGGCATACTCCAACCACTTGAAGAAATCTTCCTTCATTCCTTCGCTTACCCTTCCTTTCTCGTTAGTGGAGACTACAACAACATCTATAACTTCGTCAAGCAACAAGGGAAGGATACCATAAACAGAGGCGAAATCGGGTTCGGGTTGACCCAAGAAGAGGCAATCCACAACCTACTCTTCGTGCTAGGGTTCAATTCCTTCGGGGGCTTCACCATTTTCCTCCCATCTTTGATTGATACCGTAGCGAAAGACTCCGCGTTGCAGGAGAAGCTGAAGAAGGAAGCCAGGGAAAACGGCGGCTCAACGCTGACCTTTGACTCCGTCAAAGAGATGCCTCTCGTCCAATCGGTGGTCTACGAAACGCTGCGTATGAACCCTCCGGTTCCGCTGCAGTTCGGTCGTGCCCGAAAGGACTTCCGTTTGACTTCTCACGACTCCGTTTACGACGTGAAGAAGGGGGAGTTGCTATGCGGCTACCAGAAGCTCGTCATGAGAGACTCTCTCATCTTCGACGAACCGGACCTCTTCAAGCCGGACCGGTTCACGAAGGAAAAAGGGGCCCAGTTGCTGGACTACTTGTACTGGTCCAATGGGCCTCAAAGTGGGTCACCCAGTCTGTCCAATAAACAGTGCGCCGGCAAGGACGTTGTCACCCTCACCGCGGCCTTGATCGTGGCTCACCTGTTTCGCAGGTATGATTCCATAACCGGCGACGGCAGTTCCATCACTGCCCTTCAAAAGTCTAAGTGA 1425 0.5221 MSSSPPSLVTAAIAADLPIRQIPGSYGFPLLGPLSDRLDYFWFQKPESFFKNRMEKYKSTVFRTNVPPTFPFFVNVNPNVIAVLDVKSFSHLFDIDLVDKKDVLVGDFVPDVSFTGNMRVGVYQDPSEPQHSKVKGYIIDILKRSSGIWASELVSNLDVFWDNIESTVSKSSSASYLFPLQQFLFTFLCKVLAGADTSRDPKIAESGHVMLSRWLALQLIPITSIGILQPLEEIFLHSFAYPSFLVSGDYNNIYNFVKQQGKDTINRGEIGFGLTQEEAIHNLLFVLGFNSFGGFTIFLPSLIDTVAKDSALQEKLKKEARENGGSTLTFDSVKEMPLVQSVVYETLRMNPPVPLQFGRARKDFRLTSHDSVYDVKKGELLCGYQKLVMRDSLIFDEPDLFKPDRFTKEKGAQLLDYLYWSNGPQSGSPSLSNKQCAGKDVVTLTAALIVAHLFRRYDSITGDGSSITALQKSK 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g00862 474 FunFam Allene oxide synthase, chloroplastic 17 473 - -
Vimu4g00862 474 Gene3D Cytochrome P450 17 473 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu4g00862 474 PRINTS E-class P450 group IV signature 336 352 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu4g00862 474 PRINTS E-class P450 group IV signature 373 387 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu4g00862 474 PRINTS E-class P450 group IV signature 389 407 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu4g00862 474 PANTHER CYTOCHROME P450 26 18 457 - -
Vimu4g00862 474 SUPERFAMILY Cytochrome P450 18 464 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu4g00862 474 CDD CYP74 51 466 - -
Vimu4g00862 474 Pfam Cytochrome P450 307 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g00862 Vimu-Chr4 6919627 6926978 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu4g00862 95 474 Cytochrome P450 AT4G15440 59.635 7.46e-175 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g00862 K10528 - gmx:100784395 786.949
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g00862 4 6919627 6926978 Vimu4g00862 4 6919627 6926978 ECH