Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g00771 ATGAATTTCCAACAATCAGAGCAAGAGGTGCCGCTGCAAGACACGGGAGTTGCATTCTATCAAATAAGGGAGCAGAACTCAGAAGCCTCACTCCCCGTTGACGAGGAGGTCAGTGACAAGAACGGAAAGAGCGTAACCATGGATGAATTCATAGCCAGCATTTGGAACACAGATGAGTTCCAACTTAACCCTCCTCTACCCGTCTATGAGGAAGCTGAAAACAACAACAACGTTGCACCAGAACCCACCATTCCTCAACCAGGTTCATTCTCTGTCCCTCCCCCAATTTGCACGAAAACTGCTGATGAAGTTTGGTCTGAGATCCAGAAAAGCCAACCTGAACAAAATGAAGCTAATGACAGCCTTGCTAGTGATGAAACACTCCAAAAGGATCCCACATTTGGAGAAATGACTTTGGAGGATTTCCTAATAAAAGCTGGGGTTGTCACTGAATCAACACTGTTCACCACTATATTACCTCAGAATCATTTCGCTAACATTCCAACCAATATTCCATTTAATGCAAGCTATATATTAATTGGAACTACTGGACTTAATATGCCTATGCCCTGTGGTAGATTTGAACCACCTCAAATGCTGCCACAGAATAACCACTTTGTTGTGAGGAATTTCACTACTACAAATGTTGCTGTGGAGAATAATAATAATAATAATTCTCGAAACGTAGCAGAATCATCAAGTAGCAATGGCAAGGGTAAGAAAAGGATCATTAATGGTCCTCCTGAAGTGGTAATAGAGAGAAGGCAGCGCAGAATGCTGAAGAATCGAGAATCAGCAGCACGATCTCGTGCAAGAAGACAGATATGGTTTGCTAGTTACCATGCAAAATCTTCTGATGCATTCCAGGCATATACTGTGGAGCTTGAAGCAGAGCTGAATAATCTGAAAAATGAGAATGAAGAGCTGAAGAATATGCTGGCTGAAGATGAACGCAAGAGACTAGTAGAAGAAATTGAAGAGGCCTCTGAGTGCATCCTGGTGAGTAGCATCCTGGTGAAGAAGCTTCAATGGCAGGCATTAGAAGATGAACATGCACATTGTGAGAAAAGGAAATAA 1077 0.4243 MNFQQSEQEVPLQDTGVAFYQIREQNSEASLPVDEEVSDKNGKSVTMDEFIASIWNTDEFQLNPPLPVYEEAENNNNVAPEPTIPQPGSFSVPPPICTKTADEVWSEIQKSQPEQNEANDSLASDETLQKDPTFGEMTLEDFLIKAGVVTESTLFTTILPQNHFANIPTNIPFNASYILIGTTGLNMPMPCGRFEPPQMLPQNNHFVVRNFTTTNVAVENNNNNNSRNVAESSSSNGKGKKRIINGPPEVVIERRQRRMLKNRESAARSRARRQIWFASYHAKSSDAFQAYTVELEAELNNLKNENEELKNMLAEDERKRLVEEIEEASECILVSSILVKKLQWQALEDEHAHCEKRK 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g00771 358 SMART brlzneu 250 315 IPR004827 GO:0003700|GO:0006355
Vimu4g00771 358 SUPERFAMILY Leucine zipper domain 254 313 IPR046347 GO:0003700|GO:0006355
Vimu4g00771 358 CDD bZIP_plant_BZIP46 254 316 - -
Vimu4g00771 358 MobiDBLite consensus disorder prediction 105 125 - -
Vimu4g00771 358 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 34 316 IPR043452 GO:0003700|GO:0045893
Vimu4g00771 358 MobiDBLite consensus disorder prediction 219 240 - -
Vimu4g00771 358 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 257 272 IPR004827 GO:0003700|GO:0006355
Vimu4g00771 358 Gene3D - 252 332 - -
Vimu4g00771 358 MobiDBLite consensus disorder prediction 219 244 - -
Vimu4g00771 358 Coils Coil 285 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g00771 Vimu-Chr4 6069073 6070724 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu4g00771 22 331 bZIP Transcription Factor Family AT3G44460 36.667 6.26e-40 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g00771 K14432 - gmx:100799576 258.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g00771 4 6069073 6070724 Vimu4g00771 4 6069073 6070724 ECH