Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vimu4g00727 | ATGGTAGGAAAACTTGAAAAGAAAGCTGAAGAATTGAAGGCACTTGCATCTAAAAAGCCTGACGCTAAGGCTGGTGCTGTAGCAAAAAAAGTCAAGGTTGTTGAGCCAGAGAAAGACAATGAGGATTCTGATGATGATTCTGATGAAGATGATGCTTTGGGAACTTCTGATGAAGAGATGGAGGATGCTGACAGTGATGACAGTGATGAGGAGGATGACAGTGATGAAGATGACGATGAAGAGACCCCTCCTAAAAAGGCCGATTTGGGAAAGAAGAGACCAAATGAATCTGCATCAAAAACTCCTGTCTCCTCCAAGAAAGCTAAAAATGCTACTCCTGAAAAGAAGGATGGTAAGAAAAACTTAAAAGCAGAAACCCCTCAATCCGTGAAGAAAGGTGGAAAGACTCCCAGCAGTGAAGCTAAGGACAAGAGTCCCAAGTCGGGTGGACTTATTTGCAAGAGTTGTAGCAAGTCTTTCAATTCCGAAAGTGGTCTGCAACAACATAACAAGGCCAAGCACGGCGGTCAGTGA | 534 | 0.4363 | MVGKLEKKAEELKALASKKPDAKAGAVAKKVKVVEPEKDNEDSDDDSDEDDALGTSDEEMEDADSDDSDEEDDSDEDDDEETPPKKADLGKKRPNESASKTPVSSKKAKNATPEKKDGKKNLKAETPQSVKKGGKTPSSEAKDKSPKSGGLICKSCSKSFNSESGLQQHNKAKHGGQ | 177 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vimu4g00727 | 177 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 151 | 177 | IPR013087 | - | |
Vimu4g00727 | 177 | MobiDBLite | consensus disorder prediction | 152 | 171 | - | - | |
Vimu4g00727 | 177 | MobiDBLite | consensus disorder prediction | 14 | 38 | - | - | |
Vimu4g00727 | 177 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 153 | 174 | IPR013087 | - | |
Vimu4g00727 | 177 | MobiDBLite | consensus disorder prediction | 14 | 177 | - | - | |
Vimu4g00727 | 177 | MobiDBLite | consensus disorder prediction | 39 | 82 | - | - | |
Vimu4g00727 | 177 | MobiDBLite | consensus disorder prediction | 109 | 126 | - | - | |
Vimu4g00727 | 177 | SUPERFAMILY | beta-beta-alpha zinc fingers | 143 | 173 | IPR036236 | - |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vimu4g00727 | 94 | 174 | C2H2 Transcription Factor Family | AT5G03740 | 46.067 | 2.08e-14 | 67.8 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Vimu4g00727 | None | None | None |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vimu4g00727 | - | - | gmx:100792094 | 168.703 |