Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g00666 ATGGCAAACCTAGTTGCTCGACCCTTTGGTGGGTATGCTTCCGATGTTGCAGCGAGGGTGTTTGGAATGAGGGGAAGATTGTGGACCCTTTGGATCCTCCAAACCTTAGGAGGGGCTTTCTGTATTTGGCTGGGCCGTGCCAATTCTCTTCCTATTGCTGTCTTGGCTATGATATTGTTCTCTATAGGAGCTCAAGCAGCATGTGGTGCAACTTTTGGTATCATTCCTTTCATCTCAAGAAGGTCTTTGGGGATCATATCAGGTCTTACTGGTGCGGGTGGAAACTTTGGGTCTGGCCTCACCCAATTGGTTTTCTTTTCAACCTCGAAATTCTCAACTTCCACAGGTCTCTCGTTAATGGGAGCCATGATAGTGGCTTGCACTCTTCCTGTGACTCTTGTTCACTTCCCACAGTGGGGTAGCATGTTCCTACCTCCCTCAAAAGATGTCAACAAATCCACTGAAGAATTCTATTACACCTCTGAATGGAATGAAGAGGAGAAACAGAAGGGCTTGCACCAGTCAAGTCTCAAGTTCGCTGAGAATAGCCGATCTGAGAGAGGAAAACGCGTGGCATCAGCCCCAACACCTCCAAATACAACTCCCACCCATGTCTAA 618 0.4773 MANLVARPFGGYASDVAARVFGMRGRLWTLWILQTLGGAFCIWLGRANSLPIAVLAMILFSIGAQAACGATFGIIPFISRRSLGIISGLTGAGGNFGSGLTQLVFFSTSKFSTSTGLSLMGAMIVACTLPVTLVHFPQWGSMFLPPSKDVNKSTEEFYYTSEWNEEEKQKGLHQSSLKFAENSRSERGKRVASAPTPPNTTPTHV 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g00666 205 SUPERFAMILY MFS general substrate transporter 2 135 IPR036259 -
Vimu4g00666 205 FunFam Nitrate transporter 2.1 1 141 - -
Vimu4g00666 205 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 1 191 IPR044772 GO:0015112
Vimu4g00666 205 Gene3D MFS general substrate transporter like domains 1 142 IPR036259 -
Vimu4g00666 205 MobiDBLite consensus disorder prediction 165 205 - -
Vimu4g00666 205 MobiDBLite consensus disorder prediction 165 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g00666 Vimu-Chr4 5147528 5148145 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu4g00666 1 205 Inorganic Solute Cotransporters AT5G60780 76.329 2.53e-115 337
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g00666 K02575 - gmx:547946 374.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g00666 4 5147528 5148145 Vimu4g00666 4 5147528 5148145 ECH
Vimu4g00666 4 5147528 5148145 Vimu5g01875 5 30556029 30558055 PCT