Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g00665 ATGTCTGATATTGAGGGCTCTCCTGGAAGCTCCATGCATGGAGTCACAGGAAGAGAGCAAACTTTTCTAGCCTCTGTTGCTTCTCCAATGGTCCCCACCGACACCACAGCAAAGTTTGCTCTCCCTGTAGATTCTGAACACAAGGCCAAGGTTTTCAAACTCTTCTCGCTTGCCAATCCCCACATGAGAACCTTCCACCTTTCTTGGATCTCCTTCTTCACCTGCTTTGTCTCCACCTTCGCAGCAGCCCCTCTTGTTCCCATCATCCGCGACAACCTCAACCTCACCAAAAGCGACATTGGAAACGCCGGCGTTGCTTCTGTGTCCGGAAGCATTTTCTCTAGGCTCGCAATGGGTGCAGTGTGCGATCTCTTGGGTCCACGTTATGGCTGCGCCTTCCTCATCATGCTTTCCGCCCCTACCGTATTTTGCATGTCCTTTGTGAAAGATGCTTCTGGGTATATAGCGGTTCGGTTCATGATAGGGTTCTCCTTGGCCACGTTCGTGTCGTGCCAATACTGGATGAGCACCATGTTCAACAGCAAGATCATAGGGCTGGCGAATGGGACTGCGGCGGGGTGGGGGAACATGGGTGGTGGAGCCACTCAGCTCATAATGCCTTTGGTGTATGAACTTATTAGAAGAGCTGGGGCTACTCCCTTCACCGCTTGGAGGATTGCCTTCTTTGTTCCTGGTTGGTTGCATGTCATCATGGGGATCTTGGTCCTAACTTTAGGTCAGGACTTGCCTGATGGAAACCTTGGAGCCTTACAGAAAAAGGGTGATGTAACCAGAGATAAGTTTTCTAAGGTTAGTGATCCAAAAAGATATATATTTTCAATATCATTATATGAAAAATAA 861 0.489 MSDIEGSPGSSMHGVTGREQTFLASVASPMVPTDTTAKFALPVDSEHKAKVFKLFSLANPHMRTFHLSWISFFTCFVSTFAAAPLVPIIRDNLNLTKSDIGNAGVASVSGSIFSRLAMGAVCDLLGPRYGCAFLIMLSAPTVFCMSFVKDASGYIAVRFMIGFSLATFVSCQYWMSTMFNSKIIGLANGTAAGWGNMGGGATQLIMPLVYELIRRAGATPFTAWRIAFFVPGWLHVIMGILVLTLGQDLPDGNLGALQKKGDVTRDKFSKVSDPKRYIFSISLYEK 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g00665 286 Gene3D MFS general substrate transporter like domains 58 253 IPR036259 -
Vimu4g00665 286 SUPERFAMILY MFS general substrate transporter 59 252 IPR036259 -
Vimu4g00665 286 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 1 271 IPR044772 GO:0015112
Vimu4g00665 286 Pfam Major Facilitator Superfamily 69 248 IPR011701 GO:0022857|GO:0055085
Vimu4g00665 286 ProSiteProfiles Major facilitator superfamily (MFS) profile. 64 286 IPR020846 GO:0022857
Vimu4g00665 286 FunFam High affinity nitrate transporter 57 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g00665 Vimu-Chr4 5146357 5147217 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu4g00665 1 279 Inorganic Solute Cotransporters AT1G08090 79.577 6.62e-166 469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g00665 K02575 - gmx:100807710 517.309