Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g00656 ATGCAGTGTCTCTTTCCACAAGAAATTGTTAAAAACATAAAGACTCCACTGTTCCTTGTTCATCCAGCTTATGATTTCTGGCAGATACGCAATATCTTGGTACCTCAAGGATCATATCCCCTTGGTCACTGGCAAAGCTGCAGACGGAATATTCACAATTGTGATGCTAACATGATTGATAAACTTGATGGTAAGTACCTCTCCCTCGACCAAAGCTTGAAGATCACCGAACGGTCAAGGTTAAAGCGAAGCGAGCGATCAAGATCTAGGAGAAACGAGCGATCCGATCAGTCCAAGCATCAGAAAGCGGGAAAGCCACGTCATCCAGTAACTCCTGGAATTATTGATGATTCAGATGGAATTCCTGGAATTTCTGGCGGTTTTCTGAAAATCCTCGCTATTTCCGGCAGTTTTACAGAATACCGCCGGTACTCACTTGGCGTTGCACGTTTTTCCAACGGTCACCACTACTGTTAA 477 0.4423 MQCLFPQEIVKNIKTPLFLVHPAYDFWQIRNILVPQGSYPLGHWQSCRRNIHNCDANMIDKLDGKYLSLDQSLKITERSRLKRSERSRSRRNERSDQSKHQKAGKPRHPVTPGIIDDSDGIPGISGGFLKILAISGSFTEYRRYSLGVARFSNGHHYC 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g00656 158 MobiDBLite consensus disorder prediction 78 118 - -
Vimu4g00656 158 MobiDBLite consensus disorder prediction 78 103 - -
Vimu4g00656 158 PANTHER NOTUM-RELATED 2 74 IPR004963 GO:0016787
Vimu4g00656 158 Pfam Pectinacetylesterase 2 77 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g00656 Vimu-Chr4 5044604 5046434 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu4g00656 2 64 Carbohydrate Esterase AT3G09410 57.143 3.35e-21 86.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g00656 K19882 - gmx:100792819 114.775