Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g00605 ATGGAAGGAAGAAGCTTGGAGAATACTCCGACTTGGGCTGTGGCCGTTGTTTGCTTTGTTTTGCTCTCGGTATCCATCATCATCGAATACATCTTCAATATTATAGGAAAGAAGTGGTTGAAGAAGAAGCACAAAAGAGCGCTGCATGAGTCACTTGAAAAGATCAAATCAGGACAAAGTGTAATATCGAGGATATGTATATCAGAAAAGGTCGCCGGAACATTCCACCCCTGCACTCACCAAAGCGACCACAAAACCGATGCCCGGATATTACTGTCGGAGCTTTTCGGTTCCGATCATGACCAAAATCATCGCCGTATTTTGGCTGCCGGAGGAAGTGACAAGTGCGCGGCACAGGGTAAAGTTCCGTTTGTCTCATCAGAGGGAATTCATCAACTTCATATATTTATCTTCGTGCTGGCTGTTTTTCACGTTCTTTACTGCATTCTCACTCTGGCTCTTGGTAGAGCAAAGATTTGTTTCTTCAGGCAGTTCGTACGCTCAGTTCCTAAAGTTGATTACTTGACCTTGAGGCATGGATTTATGATGGCACATTTGGGGCCTCAAAGTCGCCATAAATTTGACTTTCGGCAATATATTAAAAGAACTTTGGAAGAAGACTTCAAAGTGGTCGTTGAAATCAGTCCTCCAATCTGGTTCATCACAGTGCTTTTTCTCCTGTTTCACACCCATGGCTGGTACTCTTATCTGTGGCTGCCATTTGCTCCTTTGATCATTGTTCTATTAGTGGGAACTAAGCTGCAAGTGATAATAACGAAGATGGGTCAAAGGATTCAAGAACGTGGAGAGGTTGTAAAGGGTGTGCCACTGGTTCAACCTGGGGATGATCTCTTCTGGTTTAACAAACCTCGACTCATTCTCTACCTCGTCAATTTCGTGCTCTTTCAGAACTCTTTCCAACTCGCCTACTTTTCATGGACTGCGCTTCAGTTTGGGATGAAATCTTGTTTCCATTCGCAGACGGAGGATGTGGTGATCAAAATTTCAATGGGGGTTTTCGTTCAATTCCTCTGCAGCTACGTAACTCTTCCTCTCTATGCTCTCGTCACACAGATGGGTTCGACCATGAAGCCAACCATATTCAACGAACGAGTAGCCATGGCTCTGAGGAATTGGCACCACGCAGCCAAGAAACACGTAAAGCAACAGAACCGTAGATCACAGTCGCAGACCCCTTTGTCAGGGCCCACAACCCCCGATCATTCTATGTCTCAGGCCCATCTCTTACGCCGTTGGCACAGTGAAATGGACACCTATCCCACTGACTCTGAAGCCCATCGTCCCTGTGAGATCGATTTAGGCCCATCATCCAAGGTGCATCATCAGGAAATGGAAATGGATCAGCTGGATCATGGCCCACCACAAAACGTCAATGACCAGACTCAACACGAGATTAATATTGAACATGGCAAGGAGTTTTCATTTGATAATAGATGA 1458 0.4534 MEGRSLENTPTWAVAVVCFVLLSVSIIIEYIFNIIGKKWLKKKHKRALHESLEKIKSGQSVISRICISEKVAGTFHPCTHQSDHKTDARILLSELFGSDHDQNHRRILAAGGSDKCAAQGKVPFVSSEGIHQLHIFIFVLAVFHVLYCILTLALGRAKICFFRQFVRSVPKVDYLTLRHGFMMAHLGPQSRHKFDFRQYIKRTLEEDFKVVVEISPPIWFITVLFLLFHTHGWYSYLWLPFAPLIIVLLVGTKLQVIITKMGQRIQERGEVVKGVPLVQPGDDLFWFNKPRLILYLVNFVLFQNSFQLAYFSWTALQFGMKSCFHSQTEDVVIKISMGVFVQFLCSYVTLPLYALVTQMGSTMKPTIFNERVAMALRNWHHAAKKHVKQQNRRSQSQTPLSGPTTPDHSMSQAHLLRRWHSEMDTYPTDSEAHRPCEIDLGPSSKVHHQEMEMDQLDHGPPQNVNDQTQHEINIEHGKEFSFDNR 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g00605 485 MobiDBLite consensus disorder prediction 440 485 - -
Vimu4g00605 485 Pfam Mlo family 4 159 IPR004326 GO:0006952|GO:0016020
Vimu4g00605 485 Pfam Mlo family 160 418 IPR004326 GO:0006952|GO:0016020
Vimu4g00605 485 MobiDBLite consensus disorder prediction 384 411 - -
Vimu4g00605 485 MobiDBLite consensus disorder prediction 471 485 - -
Vimu4g00605 485 PANTHER MLO-LIKE PROTEIN 1 159 431 IPR004326 GO:0006952|GO:0016020
Vimu4g00605 485 MobiDBLite consensus disorder prediction 440 455 - -
Vimu4g00605 485 MobiDBLite consensus disorder prediction 392 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g00605 Vimu-Chr4 4477413 4481344 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu4g00605 1 421 MLO family AT2G39200 53.550 8.89e-177 506
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g00605 K08472 - gmx:100776714 721.465
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g00605 4 4477413 4481344 Vimu4g00605 4 4477413 4481344 ECH
Vimu6g02539 6 22131277 22137805 Vimu4g00605 4 4477413 4481344 ECH
Vimu4g00605 4 4477413 4481344 Vimu5g01967 5 31471269 31477152 PCT