Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g00603 ATGGCAGGAAGTGGAGGAAGGAATTTGGACGAAACACCTACCTGGGCGGTGGCCACTAAGTGGTTGAAGAAAAAACAGAAAAGAGCTCTGTACGAGTCACTTGAAAAGATCAAATCAGGGCAAGGTCTGATATCTAGAATATGCATATCAGAAAAGGTTGCAGGGTCGTTTCACCCATGCACTCACAGAAGGAAGGAGAAAAATTACCCCCCGCCATTACAAGACGACGATTACCACCATAACCGCCACATTTTAGCGGCGGAAGCGGGTTACGACAAGTGTGCCGCCCAGGGTAAAGTCCCATTTGTCTCATCGGGAGCCATTCATCAACTCCATATATTTATCTTCGTGCTAGCTGTTTTTCACATCCTTTACTGCATTCTCACTCTGGCTCTGGGTAGGGCAAAGGTTTGTTTCTTCAGGCAGTTTGTACGCTCGGTTCCTAAAGTTGATTACTTGACCTTGAGGCATGGATTTATGATGGCGCATTTGGGGCCACACAGTCACCAGAAATTCGACTTCCGGAAATATATCAAAAGAACTTTGGAAGAGGACTTCAAAGTGGTCGTCGAAATCAGTGGGAATGAAGCTGCAAGTGATAATAACGAAGATGGGTCAAAGAATTCAAGAACGAGGAGAGGTTGTAAGGGGCATGCCTCTGGTGCAACCAGGGGATCACCTCTTCTGAACGCTTTTCAGCTTGCTTTCTTTTCATGGGCTGCGCTTCAATTTATGATGAAGTCCTGTTTCCTTTCCCAAAAGCAGGATGTGGTGATCAGAATCTCAATGGGGATCTTCGTTCAATTCCTTTGCAGCTACGTCACTCTTCCTCTCTACGCTCTCGTCACGCAGATGGGTTCAACGATGAAGGCGACGATTTTCAACGAAAGAGTAGCGATGGCTCTGAGAAATTGGCACCACACAGCGAAGAAGAACGTAAAAGAGAAGCGTGGATTACGATCGCAGAGTCCATTGTCAACGAGGCCTTCAACACCGAAGCACCCTAAGTCGTCCAAAGCTAATCTGCTGCGACGGTATCACAGTGAAATGGCCACTTATCCATCTTCTCCTATAAGGTTCGATTTTGAGGCACATCTTCCTTATGAGATTCATTCACCTCCTTCGTCAAAGGTTAATGCTGCAGCTACTTCTTCCATTGATCAGCATGAAATGGAGATGGAGGTGGAAATGGAAATTGACATGGATCAGGTCTCAGATCTCACTCAACACCAGATTGATATCGAAGACAAGCAAAAATTTTCTTTTGATAAAAGATGA 1278 0.4554 MAGSGGRNLDETPTWAVATKWLKKKQKRALYESLEKIKSGQGLISRICISEKVAGSFHPCTHRRKEKNYPPPLQDDDYHHNRHILAAEAGYDKCAAQGKVPFVSSGAIHQLHIFIFVLAVFHILYCILTLALGRAKVCFFRQFVRSVPKVDYLTLRHGFMMAHLGPHSHQKFDFRKYIKRTLEEDFKVVVEISGNEAASDNNEDGSKNSRTRRGCKGHASGATRGSPLLNAFQLAFFSWAALQFMMKSCFLSQKQDVVIRISMGIFVQFLCSYVTLPLYALVTQMGSTMKATIFNERVAMALRNWHHTAKKNVKEKRGLRSQSPLSTRPSTPKHPKSSKANLLRRYHSEMATYPSSPIRFDFEAHLPYEIHSPPSSKVNAAATSSIDQHEMEMEVEMEIDMDQVSDLTQHQIDIEDKQKFSFDKR 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g00603 425 Pfam Mlo family 19 137 IPR004326 GO:0006952|GO:0016020
Vimu4g00603 425 Pfam Mlo family 229 346 IPR004326 GO:0006952|GO:0016020
Vimu4g00603 425 Pfam Mlo family 137 193 IPR004326 GO:0006952|GO:0016020
Vimu4g00603 425 PANTHER MLO-LIKE PROTEIN 1 19 136 IPR004326 GO:0006952|GO:0016020
Vimu4g00603 425 MobiDBLite consensus disorder prediction 319 337 - -
Vimu4g00603 425 MobiDBLite consensus disorder prediction 311 340 - -
Vimu4g00603 425 MobiDBLite consensus disorder prediction 197 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g00603 Vimu-Chr4 4459099 4464571 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu4g00603 7 357 MLO family AT2G39200 37.450 1.85e-94 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g00603 K08472 - gmx:100782431 367.466
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g00603 4 4459099 4464571 Vimu4g00603 4 4459099 4464571 ECH
Vimu5g01967 5 31471269 31477152 Vimu4g00603 4 4459099 4464571 PCT