Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g00572 ATGAGGTTCAGGCGGAAAAGTCGGTCCAACGATGAAAGCGTGGAAAATGAAGTTATTGAGGATGTCAGCTCTGATAGTGAGGATGGTGAGAGGCCTGATAGTTTTGACGTAGATGAGAAAGAAAAGCAGAGGGAAAAAAGAAAAGGTCTTGATCTTGCTACCACGCTTGAACGTATTGAGAAAAACTTTGTCATCACTGATCCAAGGCTTCCAGACAATCCAATAAAACCTCCTGAACTTGATGCTCCTCTCTTACCGAAAACTGAAGAAGAAAAAGAAGACAAAGATATGGAGGATTTACAGACAAACGTTTTCTGA 318 0.4119 MRFRRKSRSNDESVENEVIEDVSSDSEDGERPDSFDVDEKEKQREKRKGLDLATTLERIEKNFVITDPRLPDNPIKPPELDAPLLPKTEEEKEDKDMEDLQTNVF 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g00572 105 MobiDBLite consensus disorder prediction 1 15 - -
Vimu4g00572 105 MobiDBLite consensus disorder prediction 28 49 - -
Vimu4g00572 105 MobiDBLite consensus disorder prediction 1 49 - -
Vimu4g00572 105 Gene3D PAS domain 36 76 - -
Vimu4g00572 105 MobiDBLite consensus disorder prediction 83 105 - -
Vimu4g00572 105 MobiDBLite consensus disorder prediction 67 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g00572 Vimu-Chr4 4164687 4171438 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu4g00572 1 75 AGC Kinase Gene Family AT3G45780 61.538 1.52e-20 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g00572 K20715 - gmx:100817565 130.568