Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g00488 ATGGCTTCATCCAGCACAACGTTGTTCCTCGTTGTGTGTCTCTTAGCCTCGCTTCTCTATCCAATCAAGGCTAACCGAGGGGAATCTGACAGAGAAAGCTTGCATTCCATGGGTCTTATATTGGTGAAACTATGGTGTTTGATCATCATGCTCGTGAGCACTTTCGCTGGAGGGATGTCTACCTACTTCTTCCGCTGGAATGAGACTTTTCTTGTGTTGGGAACACAGTTCGCTGGTGGGGTTTTCTTGGGAAGTTCTTTGATGCATTTCTTGGGCGATTCTAATGAGACTTTTCGAGAGCTCACCACAAAAACTTACCCTTTTGCCTTTATGCTGGCTTCATCTGGGTACCTTCTCACCATGCTTGGTGACTGCGTAGTAGGCTTTGTCAACAGCAATACCAAGACGAACCCCAGAGTGGTGGAACTGGAAGGAGGGACAGCATCCCAAGAGCATGAGCAAACCACGGATCACTGCGCAGTGGAGGCAACAAACCCTATGTTGTTGAAAACTTCCTCCAAGGGAGACACCATTCTACTAATCCTTGCACTTTGCTTCCATTCAGTTTTTGAGGGCATTGCCGTTGGGGTTGCAGGTACGAAGAGAGATGCGTGGAAGAACTTGTGGACAATATCCTTGCACAAGATATTTGCTGCGATCGCAATGGGAATTGCTTTGTTAAGGATGTTACCTAAGAGACCCTTATTAACAAGTGCAGTATATTCTTTGACCTTTGCAGTATCAAGCCCCGCTGGTGTGGTGATTGGAATTGCCGTAGACGCGACAACTCGAGGAAGCACCGCAGATTGGATGTTTGCCATAACGATGGGCATTGCTTGTGGAGTGTTCATCTATGTTGCCATTAATCATTTAATAGCCAAAGGCTTCAAACAGAAGGGGACAAGCCGTTTCGACACCCCCTGGTTTAGGTTTCTCGCAGTGCTTTCTGGTGTAGCAGTTATTGCAGTTGTCATGATCTGGGACTGA 987 0.4701 MASSSTTLFLVVCLLASLLYPIKANRGESDRESLHSMGLILVKLWCLIIMLVSTFAGGMSTYFFRWNETFLVLGTQFAGGVFLGSSLMHFLGDSNETFRELTTKTYPFAFMLASSGYLLTMLGDCVVGFVNSNTKTNPRVVELEGGTASQEHEQTTDHCAVEATNPMLLKTSSKGDTILLILALCFHSVFEGIAVGVAGTKRDAWKNLWTISLHKIFAAIAMGIALLRMLPKRPLLTSAVYSLTFAVSSPAGVVIGIAVDATTRGSTADWMFAITMGIACGVFIYVAINHLIAKGFKQKGTSRFDTPWFRFLAVLSGVAVIAVVMIWD 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g00488 328 PANTHER ZINC/IRON TRANSPORTER 42 323 - -
Vimu4g00488 328 Pfam ZIP Zinc transporter 41 324 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g00488 Vimu-Chr4 3537809 3538887 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu4g00488 33 328 Inorganic Solute Cotransporters AT1G55910 55.921 2.38e-119 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g00488 K14709 - gmx:100776614 529.25