Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g00487 ATGAAGACCCTAAAGTCAACGTTCCTCGTTGTGTGTCTCTTGGCCGCGCTCGTCTGTCCAACCAAGGCTCACGGAGGAAGTGGTGATGACTCTCACGATGATGATTCCCACAGCGAAGATTTGCATGCCAAGAGTCTGATCCTTGTCAAAATATGGTGTTTGATGATCTTCTTTGTGAGCACTTTCGCTGGTGGGGTGTCTCCGTATTTCTACCGATGGAACGAGAATTTTCTTCTTTTGGGGACTCAGTTCGCTGCTGGGGTTTTCTTGGGAACCTCTTTGATGCATTTCTTGAGCGATTCTAACGAGACTTTCCGAGACCTGACCACAAAATCTTACCCTTTTGCCTTCATGCTTGCCTCATCTGGTTACCTTCTCACCATGCTTGGTGACTGCGTTGTCGTTTTTGTCACCGGCAATAGCAAGAGGGAAGCCAAAGTGTTGGAACTGGAAGGTGGGACAACACCACAGGATCATGACCTAGCTGGAAATCACTGTGCCGTGGACACCACAAACCCTATGTTATTGAAGACTTCTTCTGTGGGAGACACCATTCTTCTCATCGTTGCACTGTGCTTCCATTCGGTTTTTGAGGGCATTGCAGTTGGAGTTGCAGGTACTAAAGCGGATGCATGGAGGAACTTATGGACGATATCCTTACACAAGATATTTGCTGCCATTGCAATGGGAATTGCTTTGCTGAGGATGTTACCTAAGAGACCCTTAGTAACAACAGCAGCATATTCTTTCGCCTTTGCTATCTCAAGCCCCATCGGTGTGGGGATTGGCATTGCCATAAACGCTACAACACAAGGACGCACAGCAGATTGGATGTTTGCTATAACAATGGGTATTGCTTGTGGGGTGTTTATCTATGTTGCCATCAATCATTTAATATCCAAAGGCTTCAAACCGCAGAAACCAACGCGTTTCGACACTCCCTGGTTTAGGTTTCTCGCTGTGCTTTCTGGTGTAGCTGTTATTGCAGTTGTCATGATCTGGGACTGA 1008 0.4683 MKTLKSTFLVVCLLAALVCPTKAHGGSGDDSHDDDSHSEDLHAKSLILVKIWCLMIFFVSTFAGGVSPYFYRWNENFLLLGTQFAAGVFLGTSLMHFLSDSNETFRDLTTKSYPFAFMLASSGYLLTMLGDCVVVFVTGNSKREAKVLELEGGTTPQDHDLAGNHCAVDTTNPMLLKTSSVGDTILLIVALCFHSVFEGIAVGVAGTKADAWRNLWTISLHKIFAAIAMGIALLRMLPKRPLVTTAAYSFAFAISSPIGVGIGIAINATTQGRTADWMFAITMGIACGVFIYVAINHLISKGFKPQKPTRFDTPWFRFLAVLSGVAVIAVVMIWD 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g00487 335 PANTHER ZINC/IRON TRANSPORTER 49 330 - -
Vimu4g00487 335 Pfam ZIP Zinc transporter 48 331 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g00487 Vimu-Chr4 3532099 3533385 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu4g00487 20 335 Inorganic Solute Cotransporters AT1G55910 58.282 8.61e-132 377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g00487 K14709 - gmx:100788541 555.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g00487 4 3532099 3533385 Vimu4g00487 4 3532099 3533385 ECH