Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vimu4g00435 | ATGGATGCAGAAAAATCAGTAGAGGATCGATTCTCCAAGCTTCATCCTTCCATGCCAGTAAACACCAAAATTGGAATAGTGGGTGCTGGTCCAAGTGGCTTATCAGCTGCTTATGCACTGGTCAGGCTTGGATATAATAATGTCACTGTCTTAGAGAAACATCATTCAGTTGGGGGCATGTGTGAGTCAGTAGAAATTGAAGGAAGGGTTTATGATCTAGGTGGCCAAGTTCTGGCTGCAAGCAGTGCTCCAGTCATCTTTCACTTGGCAAAAGAGACAGGTTCTCCACTAGAAGAAATGGACTCCCACAAGCTTGCTGTTATTGACAGTTCCTCAGGAAAATACCAAGATATCAAAGTTGCTGATGATTATGTATCTGTCATGTCACTTACATTAGCAATCCAAGAAAAGGTGAAGCATTCGGGTCGTTTTGGGGTTCATGCTGTCAGTGAAGTTGCTTCAGACTTAGCTCCAGAATATCTTGAGCAACATGGACTTAAATCTATCCCAAAATCTGTGGCTTATGGTTACACTGCTTCAGGATACGGGTTTGTTCAAGATATGCCTTATGCCTACCTTCATGAATTTACCAGAACTTCAATGGCTGGAAAAATTCGACGATTTAAAGGTGGATATACGAGTCTTTGGCAGAGGATTGCTGAATCACTTCCTATAAAACTTCACTGTAACACTGAAGTGCTCACTATCAAGAGGAACTCTGATTGTGTGACCGTTAATGTCAAGTGCTCGAATGAAATTGAAACTATGGAATTTGATAAGATCATAATCTCCGGCAACTTCCCACTAAAATATGGAAGAACTTATAGATCAGTGCCTTCAACAAACTCAGAGTGCGAATCAGAAGTCATGGATGCAAGTGAAGTTGAAAAGGATTTATTCAGCAAAGTTGAAACAAATGACTACTACACAACTGTTTTAAAGATAAAGGGACTGGAACACATGCCTGTTGGATTTTATTATTTTAAAGAATATATGGAAGATCCTAGCACAATTGGAAATCCAGTTGCCATGCAGAAGTTTTATGCAGACAGTAATATATTCTTGTTCTGGTCCTATGGCAACTCTGCCGATATTAAGGGACCAACGGTCAATGAGCTTGCAATCAAATCAGTAAAGTCCATGGGAGGAGAAGTTGAGAATTTCATTCTTCAACGTCGTTTTAAGTACTTTCCTCACGTCAGCAGCCAAGATATGAGAAACGGATTCTATGAAAAGTTGGAGTCGGAGCTTCAAGGTTCAAGAAATACTTATTATGTCGGTGGGCTTATGGCGTTTGAGCTTACAGAGAGAAATTCATCTTATGCCATGGCTTTGATCTGCAAGAAGTTTTCAAATAGCAGTGATTTGCCATTGTTTCCTTACACTAAGAGTTTGTTTCCCTTGCAAACTGAGTTCCAGAAAAAGGAGCCTAAAGAACTTGGTGAATTGCCTGGAGTGCAGTTTCCCAATTTGCCAACTTTGAATAGCTATTTAAAGCATTGGGGAACTGATCCAGTCACTCAAAACAGAACTCTTTACACTTGGATAAATGAAGGAGGAACAGTGGGTGGCAAGAGGACATATAGAGAACAACACTTAAATGCTTCTTGTATTGCACATAAGCTCTTAACAAGTGAAAAGCCAGTGATCAAGCCTGGTGACAGAGTTCTCCTAGTCTATGTTCCTGGCCTAGATTTCATTGATGCCTTCTTTGGATGTCTAAGAGCAAAAGTTTTACCAGTCCCAGTTCTTCCCCCGGACCCCATGCAAAGAGGTGGACAAGCACTTCTAAAGATTGAGAACATTGCCAAGTCATGTGGCATAGTGGCGATTTTATCAACAGTAGCTTATCATTCAGCAGTACGTGCAGGTTTGGTGAAAAGTTTTATCTCATTAACTGGAAAGATTGGGAAACCCGCAGCTCAGTGGCCTAAACTTCCTTGGCTGCACACTGACACTTGGGTCAATAATAACTCAAGAAATTTGGCTTTGGAAGATGCAGGCGATCAATGTGAGTCCAAGCCTGGTGATTTATGTTTCTTGCAGTTTACCTCAGGTTCAACTGGTGATGCTAAAGGAGTCATGATAACACATGGAGGGCTTATTCACAATGTGAAGTTGATGAAAAGCATATACAAGAGCACCTCAAGGACTATGCTAGTGAGTTGGCTTCCTCAGTATCATGACATGGGGCTGATTGGAGGACTTTTTACAGCTCTTGTTAGCGGTGGATCTGCAGTGCTTTTCTCACCGATAACATTTATTAAGAAACCACTCTTGTGGCTTGAAACCATGAGCAAGTATCAAGCAACTCACAGTGCTGGCCCCAACTTTGCTTTTGAGTTGGTTGTTCGAAGGTTAGAGTCTGAAAAAGACAAGCTTCAGAATTTAAACCTTTCATCCATGATTTTTCTCATGGTTGCTGCTGAGCCAGTGAGGCTGAAGACCCTGAAAAGGTTTCTTGATTTAACTGCTTCTTTTGGCTTATCTCAGAAGGTGATGGCTCCAGGATATGGCTTAGCAGAAAATTGTGTGTTTGTCAGTTGTGCATTTGGTGAAGGGCGTCCTATTCTTGTTGACTGGCAGGGAAGAGTTTCTTGTGGATACATTCACCCAGGTGATGCAGATATTGACATTAGAATAGTCGATCCAGAGAACGGTGAAGAGATTCGAGAAGATGGAAAGGAAGGAGAAATCTGGATAAGTAGTCCAAGTGCTGGAATAGGATACTGGGGAAAGGAAGAACTGAGTCAGAAAACTTTTAGAAATGAGCTTCAGAACCATCCTGGACGAAACTACACAAGAACTGGAGACTTGGGAAGAATAATTGATGGGAAGCTATTCATCACCGGGAGAATCAAGGATCTTATCATTGTGGCTGGAAGAAACATCTACTCAGCAGATGTTGAGAAAACAGTAGAGAGTTCATCTGAATTTCTTCGTCCTGGGTGTTGTGCAGTCGTTGGTGTCCCTGAGGAGGTTCTATCAGCAAAGGGGATTACCCTGCCGGATGGATCTGACCAAGTTGGCTTGGTTGTGGTAGCTGAAGTTAGGGATGCTAAAGCGGTGAGCAAAGATGTGATCGAGCATATTCAGACTCGTGTGGCAGAAGAACATGGAGTCAGTGTTGCTTCTGTCAAGCTGATCAAGCCAAGAACCATCAGCAAAACAACATCAGGAAAAATCAAGAGATTTGAATGTCTCAAACAGTTTGCAGATGATACACTGAATTTGGTGCCTCAACCTATTCAGACAAGGAGAACACTGTTAAGATCATTTACTACAGGAACATGCACAGAAGGAAGAACACCCCGGGCCCAGCTGGTGAGAAGTAGCAATCCTCTGCCTATTCCAAGAATCAGTAACAAGGAAATTGTGGAGCACTTGAAAAGGCTTGTTTCTGAGCACTCAGGAATCCCAGTCAAAGATATCTCAGTCACAGAAAACATGTCTGCATACGGAATTGATTCAATCGGAGTGGTTAAAGCAACTCAAAAACTCTCAGATTTCCTGGGTGTGCCAGTTGCAGCTATAGATGTCTTCACTGCATCATGCATTCAAGAATTGGCTAACTTCTCCGAGAATCTTATGTTAAAGTCTCAACCTCAAATTATGAGCAATTCATCCCATGCTCTAGGTGCTGAAATTGACACCACTGATATGGTTGTGGATGTGTCCAGGTCTCGCCAATGGGGTATCCGTTTACTCCAACTCCTAGCACTAATTTATATTTCTGTCATGCTGTTTTCTCCTGCTTATCTATCCATCACTGCTTTTCAAAGTTTCATACCAAATGCCAGCGAATCGGTAAATGGAATGCCTTGGTCAAACTATTTGCTTTCCTTGACTTTGGCACCCCTTTCTTGGATCCTTTGCATGGTTTCTACTTGCATTTGCATTTCACTTTTGGGGAATTCTTTCTTGAGGCCAAACTATGCCCTGACACCCGAAATATCCATCTATTCAATGGATTTTGTCAAGTGGTGGGCGCTGTATAAAGCTCAGGAAATTTCTTCAAAAGTTTTGGCAACACACCTCAGAGGAACAGTGTTTCTGAAATACTGGTTTGAGATGCTTGGTGCAAGAATTGGATCCTTAGTTTTGCTGGACACAGTTGATATCACAGACCCTTCTCTGGTTTCAATTGGAGATGAAGTTGCCATTGCTGAGGGGGTTTTGGTTCAAAGCCATGAGGTGAAGAATGGAATTCTAAGTCTCCTCCCTATTAGGATAGGTAAAAATTCTTCAATTGGGCCTTATTCTACCATTCAGAAAGGAAGTGTGATTAAAGAAGGATCTGAAGTAGAACCCCTGCAAAAGGTTGAAGGAGGCCAACATGTACCCAAACCTGCTAAGCTTAATAACGTTAAAGAGAATGCAGTGTTGCTAGTTACAACCAGCAAAACTCAGTCTAATGCCATGTACCATTTTCTGGGGATCTATCTTACTGGCTTTCTCAGCTCCCTTGCTGCAGCCATTGCTTACATCCTGTACATATGGTTCTTCCAGAGACCTGCATCATTCCAACACTTTTCATTTGTTTGCTTATGTGGGGCATTCCATTGGATCCCATTTACCATTGTTGCATATGCCACCATGTTTTCTGATATCCCATCAAATCCTATTTTCTTTACCATTTCATTTTCCGGCGCGTACTTGCTTCATGGTCTCATACTCACCTCTCTCACCTGCGCCTTGACCCGTTTGCTCAAATTCAGTCAAAACCAAACCCATTTTAAAACCCGGCTTAGACATCAATTGACCATTTCCTGCCACCAAAGATTTGCCAAGCTTCTCTCGGGAACAGAAGCCTTCTGCATATATTTACGCCTTTTGGGTGCAAAAATTGGCAAGCACTGTTCTATCAGAGCCATCAACCCAGTATCAAACCCCGAGTTAATGTCAATAGGTGATGGAGTCCATCTTGGTGATTTTAGCAAGATAATCACCGGTTTCTACTATTCAAACGGATATGCTTGTGGAAAAATAGAGGTTCAGGAAAATTCAGTAGTGGGAAGTCAAAGCCTAATCCTCCCAGGCTCTGTTGTAGAAAAGAATGTCATTCTCGGTGCTCTTTCAGTTGCTCCAATGAATTCCATACTCCATGAGGGTAGCGTGTATATTGGATCTCAAACCCGAGTTGCAATCAGGAACTCTTCAAACTCTTTAGATGAACGGATAGAGGAAATGAACATGGAATACAAAAAAGTAGTTGCAAATATGGCTGCAAATTTAGCTGCAACAACTATCAATGTCAAAGCAAGATACTTCCACCGCATTGGTGTCAGTGGAAAGGGGCGCTTGAAAATCTATGAAAAACTTGAGGGCATTCCACTGCACAAGGTTTTTCAACCTGGTAAAAGCTACCCCGTCATGTTAAGACACAGTAATAGCTTGAGTGCTGATGATGATGCTAGGATCGATGCACGTGGTGCAGCTTTGAGGATTCTTTCCGATGCACCCGATTCTAACCGTGTCCCCCTCATTGACCTGACACTAAAAACTGGCAATGCGTTTTATGCTCGCACTATTGCTGATTTTGCAAGCTGGCTTGTGTGTGGACTTGCTGCGAGAGAAGAACTTGTCAAGCGTACCCCACATGTTCGTGACGCAGTGTGGAATTCACTAAGACATGCTCACTCATATGCTGAATTGCATTACTACTCAAACATTTGCAGGCTCATGCGCTTCACTGATGGACAAGAAATGTACGTGAAGTTTAAGCTGAGGCCTATTGACAGAAGCATTGGTGAGGACACAGGTAAGGTAAAACCAACTGGGATTCTTCCACCGGAAACAGGTGCAATTCCAAGGGATGAAACTGATACACGCCCGTTACTTTTCCTTGCTGAAGATTTTCAACGGCGCGTGAGTTCCCCCGGCGGAGTTCGCTATGTCTTCCAAGTGCAACTCCGACCAGTGCCTGAAGATGAAGCCACACGTGACATCGCACTAGACTGCACCAAACCATGGAATGAAAGTGAGTTCCCTTACCTTGATGTTGGAGAGATAAACATCACCGAGAATCTCTCAAGGGAAGAATCAGACAGGCTTGAATTTAACCCCTATCTCAAAAGCCATGAGTTGGATGTGATCCCTGCCACTTCCAACACCCAAAGTGCCTCAATCGATCATGGCCGCTCATTGATCTACGAGATTTGCCAGCACGTGCGTAATAGACAGCCACTCCCAGTCTCTTGGAGAAACCTCGTAGAACAATCTATCGTTAAGGTAGACTTGTCCTGCTGCCCTGTCGCAGCATCAGTAGCAACATCAAAGCCCAAAAGGGAGACAAAAATGGTGACAACCTTAACCTTAACAAGAACCTGGTACCAGACATTCTCGGCGGTTTTCACTCAACCGTTGCTCCAAGCAGTTTTGCCTTACACGGTGGTGGGTTTGTCTGTTTTTTCCCCTTTGAATTTTGTCATGAACATGAAGAACGCTGAGAAAGTCTCGGTGCAATGGTTGTTTCCTTTGTTTTGGATTCTCTCGGGTGTTATGGGCGCACTGGCATGTGTTGTGGCGAAATGGGTTCTGGTGGGAAGGAAGAGAGAGGGTGAAACAGTAGCCTTGTGGAGCAAAAGGGTCACCATGGATAGCACGTGGCAAGCCATTAGAACGCTGGTTGGGGAGTATTTCATGGACATAGCAAGTGGGTCATTTTTGTTCGTGTTATGGATGAGGTTGATGGGTGCAGATATAGACATAGATGGTGATGCTTACGTTGACAGCATGGGAGCTTTGTTGAACCCAGAAATGGTGAAGATTGAGAGAGGAGGGTGTGTGGGAAGAGAAGCGTTGCTATTTGGACACATATATGAAGGAGATGAAGGTGGAATGGTGAAGTTTGGTGGAATCAAAATTGGTGAAGATGGATTTGTAGGAAGTAGAGCTGTGGTAATGCCTGGTGTTCATTTGGAGAATGAAGCCAATCTCTCAGTCTTGTCTCTTGCCATGAAAGGAGAAATAGTTAGGTCAAGATAA | 6987 | 0.4311 | MDAEKSVEDRFSKLHPSMPVNTKIGIVGAGPSGLSAAYALVRLGYNNVTVLEKHHSVGGMCESVEIEGRVYDLGGQVLAASSAPVIFHLAKETGSPLEEMDSHKLAVIDSSSGKYQDIKVADDYVSVMSLTLAIQEKVKHSGRFGVHAVSEVASDLAPEYLEQHGLKSIPKSVAYGYTASGYGFVQDMPYAYLHEFTRTSMAGKIRRFKGGYTSLWQRIAESLPIKLHCNTEVLTIKRNSDCVTVNVKCSNEIETMEFDKIIISGNFPLKYGRTYRSVPSTNSECESEVMDASEVEKDLFSKVETNDYYTTVLKIKGLEHMPVGFYYFKEYMEDPSTIGNPVAMQKFYADSNIFLFWSYGNSADIKGPTVNELAIKSVKSMGGEVENFILQRRFKYFPHVSSQDMRNGFYEKLESELQGSRNTYYVGGLMAFELTERNSSYAMALICKKFSNSSDLPLFPYTKSLFPLQTEFQKKEPKELGELPGVQFPNLPTLNSYLKHWGTDPVTQNRTLYTWINEGGTVGGKRTYREQHLNASCIAHKLLTSEKPVIKPGDRVLLVYVPGLDFIDAFFGCLRAKVLPVPVLPPDPMQRGGQALLKIENIAKSCGIVAILSTVAYHSAVRAGLVKSFISLTGKIGKPAAQWPKLPWLHTDTWVNNNSRNLALEDAGDQCESKPGDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMKSIYKSTSRTMLVSWLPQYHDMGLIGGLFTALVSGGSAVLFSPITFIKKPLLWLETMSKYQATHSAGPNFAFELVVRRLESEKDKLQNLNLSSMIFLMVAAEPVRLKTLKRFLDLTASFGLSQKVMAPGYGLAENCVFVSCAFGEGRPILVDWQGRVSCGYIHPGDADIDIRIVDPENGEEIREDGKEGEIWISSPSAGIGYWGKEELSQKTFRNELQNHPGRNYTRTGDLGRIIDGKLFITGRIKDLIIVAGRNIYSADVEKTVESSSEFLRPGCCAVVGVPEEVLSAKGITLPDGSDQVGLVVVAEVRDAKAVSKDVIEHIQTRVAEEHGVSVASVKLIKPRTISKTTSGKIKRFECLKQFADDTLNLVPQPIQTRRTLLRSFTTGTCTEGRTPRAQLVRSSNPLPIPRISNKEIVEHLKRLVSEHSGIPVKDISVTENMSAYGIDSIGVVKATQKLSDFLGVPVAAIDVFTASCIQELANFSENLMLKSQPQIMSNSSHALGAEIDTTDMVVDVSRSRQWGIRLLQLLALIYISVMLFSPAYLSITAFQSFIPNASESVNGMPWSNYLLSLTLAPLSWILCMVSTCICISLLGNSFLRPNYALTPEISIYSMDFVKWWALYKAQEISSKVLATHLRGTVFLKYWFEMLGARIGSLVLLDTVDITDPSLVSIGDEVAIAEGVLVQSHEVKNGILSLLPIRIGKNSSIGPYSTIQKGSVIKEGSEVEPLQKVEGGQHVPKPAKLNNVKENAVLLVTTSKTQSNAMYHFLGIYLTGFLSSLAAAIAYILYIWFFQRPASFQHFSFVCLCGAFHWIPFTIVAYATMFSDIPSNPIFFTISFSGAYLLHGLILTSLTCALTRLLKFSQNQTHFKTRLRHQLTISCHQRFAKLLSGTEAFCIYLRLLGAKIGKHCSIRAINPVSNPELMSIGDGVHLGDFSKIITGFYYSNGYACGKIEVQENSVVGSQSLILPGSVVEKNVILGALSVAPMNSILHEGSVYIGSQTRVAIRNSSNSLDERIEEMNMEYKKVVANMAANLAATTINVKARYFHRIGVSGKGRLKIYEKLEGIPLHKVFQPGKSYPVMLRHSNSLSADDDARIDARGAALRILSDAPDSNRVPLIDLTLKTGNAFYARTIADFASWLVCGLAAREELVKRTPHVRDAVWNSLRHAHSYAELHYYSNICRLMRFTDGQEMYVKFKLRPIDRSIGEDTGKVKPTGILPPETGAIPRDETDTRPLLFLAEDFQRRVSSPGGVRYVFQVQLRPVPEDEATRDIALDCTKPWNESEFPYLDVGEINITENLSREESDRLEFNPYLKSHELDVIPATSNTQSASIDHGRSLIYEICQHVRNRQPLPVSWRNLVEQSIVKVDLSCCPVAASVATSKPKRETKMVTTLTLTRTWYQTFSAVFTQPLLQAVLPYTVVGLSVFSPLNFVMNMKNAEKVSVQWLFPLFWILSGVMGALACVVAKWVLVGRKREGETVALWSKRVTMDSTWQAIRTLVGEYFMDIASGSFLFVLWMRLMGADIDIDGDAYVDSMGALLNPEMVKIERGGCVGREALLFGHIYEGDEGGMVKFGGIKIGEDGFVGSRAVVMPGVHLENEANLSVLSLAMKGEIVRSR | 2328 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vimu4g00435 | 2328 | ProSitePatterns | Putative AMP-binding domain signature. | 681 | 692 | IPR020845 | - | |
| Vimu4g00435 | 2328 | SUPERFAMILY | Acetyl-CoA synthetase-like | 504 | 1081 | - | - | |
| Vimu4g00435 | 2328 | Gene3D | - | 94 | 202 | - | - | |
| Vimu4g00435 | 2328 | ProSitePatterns | Phosphopantetheine attachment site. | 1152 | 1167 | IPR006162 | - | |
| Vimu4g00435 | 2328 | SUPERFAMILY | FAD/NAD(P)-binding domain | 18 | 271 | IPR036188 | - | |
| Vimu4g00435 | 2328 | Gene3D | - | 303 | 396 | - | - | |
| Vimu4g00435 | 2328 | Gene3D | Hexapeptide repeat proteins | 1360 | 1473 | - | - | |
| Vimu4g00435 | 2328 | SUPERFAMILY | Trimeric LpxA-like enzymes | 2174 | 2320 | IPR011004 | - | |
| Vimu4g00435 | 2328 | SUPERFAMILY | Heme-dependent catalase-like | 1747 | 2059 | IPR020835 | GO:0020037 | |
| Vimu4g00435 | 2328 | Gene3D | - | 482 | 953 | IPR042099 | - |
Showing 1 to 10 of 27 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vimu4g00435 | - | - | gsj:114374875 | 3645.13 |
Showing 1 to 1 of 1 entries