LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vimu4g00392	ATGGATAAGGACAAATCTCTAGGTCACGGGGGAGGTTTGCCACCTCCCTCGGCACGTTATTCGGGTTACTCACCTTCCGGAACTGCGTTCAGTGTGAAATCTGAGCCGCCTTCGTCTTCGACGTCGTCGTATCCGCCACTGGCTCCGGGAATTTCCACACCGGAGTCTAGTGGGTTTAGTCATGATATTAGCAGAATGCCCGATAATCCTCCGAGAAATAGAGGTCACAGGCGTGCTCATTCCGAGATTCTTACCCTACCGGATGATATTAGCTTTGACAGTGACCTTGGTGTGGTTGGAGGTGCCGATGGGCCTTCCTTCTCCGACGAAGCCGAGGAGGACTTGTTGTCAATGTACCTTGATATGGATAAGTTCAATTCGTCGTCGGCGACGTCCACGTTTCAAATGGGCGAACCGTCTGGTGCAATGGGAGCGTCGGGTTCGGCATCGGCATCGGGGGCACCCACCTCTTCTGCAGAGAATAGTGCTGTTGGAACTCTTGAACGGCCCAGAGTTAGACACCAGCATAGTCAATCCATGGATGGATCAACTACCATCAAGCCTGAGCTGCTGGTTTCTGGTTCGGAAGACTTGTCTGCGGCGGATTCCAAAAAAGCAATGTCAGCTGCTAAGCTTGCTGAGCTTGCCTTGATTGACCCCAAACGTGCGAAAAGGTATGCTTTATGA	687	0.5211	MDKDKSLGHGGGLPPPSARYSGYSPSGTAFSVKSEPPSSSTSSYPPLAPGISTPESSGFSHDISRMPDNPPRNRGHRRAHSEILTLPDDISFDSDLGVVGGADGPSFSDEAEEDLLSMYLDMDKFNSSSATSTFQMGEPSGAMGASGSASASGAPTSSAENSAVGTLERPRVRHQHSQSMDGSTTIKPELLVSGSEDLSAADSKKAMSAAKLAELALIDPKRAKRYAL	228

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vimu4g00392	228	MobiDBLite	consensus disorder prediction	129	164	-	-
	Vimu4g00392	228	MobiDBLite	consensus disorder prediction	21	63	-	-
	Vimu4g00392	228	MobiDBLite	consensus disorder prediction	129	191	-	-
	Vimu4g00392	228	PANTHER	TRANSCRIPTION FACTOR POSF21-RELATED	35	225	-	-
	Vimu4g00392	228	MobiDBLite	consensus disorder prediction	67	84	-	-
	Vimu4g00392	228	MobiDBLite	consensus disorder prediction	1	91	-	-

Showing 1 to 6 of 6 entries

Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vimu4g00392	19	225	bZIP Transcription Factor Family	AT1G06070	67.308	2.76e-90	270

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vimu4g00392	-		-	gmx:100786738	322.398

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Vimu4g00392	4	2797818	2798504	Vimu4g00392	4	2797818	2798504	ECH
	Vimu4g00392	4	2797818	2798504	Vimu5g02250	5	33671783	33673230	PCT

Showing 1 to 2 of 2 entries