Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vimu4g00356 | ATGACGCGGGGGAGGATCAGGGCAAGACTCCGTAGGAGGAGCCATCTTTACACATTTGGTTGTCTGAAGCCAACCACCACTGAGGAGTTGCCCTATTCACTTCAAGGTCCTGGCTACTCGCGAACAGTCTTCTGCAACCAGCCTCAACTCCATGAAAAGAATTCCTTATTTTACTGCAAGAATGTTATATCAACCACCAAGTACAATGTCATAACGTTTCTTCCTAAGGCATTGTTTGAGCAGTTTCGAAGGGTTGCTAACATATACTTTCTTTTGGCTGCTTGCCTTTCGGCTTCTCCAATTTCGCCTTTTAGCGCACTGAGCATGGTTGCACCTCTGGCGTTTGTTGTGGGACTTAGTATGGTGAAGGAGGCATTGGAGGATTCTCGCAGGTTCTTTCAGGATGTCAAAGTTAATCGACGGAAAGTTTGTCTCCATATAGGCAATGGCACTTTCGGCCTAAGATCGTGGCAGAAGATTGTGGTTGGGGATGTGGTCAAAGTAGAAAAAGATCAATTTTTTCCAGCCGACTTGCTTCTCTTGGCGTCAAGTTATGAGGATGGAATATGCTATGTGGAAACAATGAATTTAGATGGAGAGACCAACTTGAAGGTGAAGAGATCCTTGGAGGCTACCTTGTCTCTGGATCACGACGAGGCTTTTAAGGATTTCTCTGGAACAATATATTGTGAAGATCCAAATCCCAATCTTTACACTTTTATTGGGAACTTTGAGCATGAAAATCAGGTTTATCCTCTTGATCCTAGTCAAATTCTTCTCAGAGATTCGAAGCTTAGAAATACTGATCATGTTTATGGAGTGGTCATTTTCACTGGACATGACAGCAAAGTCATGCAGAATTCTACAAAATCCCCTTCAAAGAGAAGCACAATAGAAAAAAAGATGGATTATATCATATATACACTTTTCACTGTCCTTATATTGATATCTTTTATTAGTTCAATAGGATTTGTTGCAAAGACCAAATACCAAGCCCCAACTTGGTGGTATTTACGGCCTGACAATATTGAATACCAGTTTGATCCTGAGAAAATTGGATTGGCTGGAATGAGCCATCTGATTACTGCACTCATTCTCTATGGATATTTGATTCCTATCTCGCTTTATGTTTCAATTGAGGTTGTGAAGGTATTACAGGCAACCTTCATTGATCAAGACATTCAAATGTATGATGATGAAACTGGAACTCCAGCTGAAGCACGGACATCAAATTTGAATGAAGAGTTGGGTCAGGTAGACACCATCCTCTCTGATAAAACTGGCACTTTAACTTGCAACCAGATGGACTTTTTGAAGTGCTCCATTGCCGGTACTGCATATGGTGTTCGTTCCAGTGAGGTTGAACTTGCTGCAGCAAAGCAGATGGCTTCTGATCTTGAGGAGCCGGACATGGATATGTCTAATTTTTCCATTCCTGAGGAGAGTAAAGTGCCATGGGAAAATATCACTGTAGATGAAGAATCTGAACTTGGGAATGTTGCTAATTCCAAGAATGATGAAGATCAAAGGACTTCCATAAAGGGATTTGGTTTTGAAGATGATCGCCTCATGAATGGTAACTGGATGAAAGAACCCAATGCCGATGTCCTTTTACTGTTTTTCCGGATATTAGCAATTTGCCATACTGCCATCCCGGAACTAAATGAGGAGACCGACAATTGTACATATGAGGCCGAGTCACCTGATGAAGGGGCTTTTCTAGTAGCAGCCAGAGAATTTGGTTTTGAGTTTTATAGGAGAACTCAATCAAGTGTTGTCATCCGCGAAAGATTTGCTGCCTCGGGACAAGTGGTTCAAAGAGAATATAAAATTTTGAATCTGCTGGATTTTACTAGCAAAAGAAAGCGCATGTCAGTGATAGTGCGTGACGAGGAGGGAAACATCATTCTTTTTTGCAAAGGAGCTGACAGTATCATATTTGATCGACTGTCTAAGAATGGAAAAATGTATTTGGACGCTACTACTAGACATTTGAATGAATATGGAGAAGCTGGCTTGAGAACACTAGCCTTGGCCTATAGAGAGCTTGACGACCTAGAGTACTCTGTTTGGAATAGCAAGTTTCAGAAGGCCAAAACAGCTATTGGGCCTGACAGAGAGGCAATGCTTGATCAGGTTTCAGATGTTATGGAAAGAGAGTTGATACTTGTTGGCGCTACTGCCGTGGAAGATAAACTACAGAAAGGGTCAAAATATCTTCTTGCTTCGCTCTTTGCCTCAACATTTTGTTCTCCTCAGGTGCCACAATGCATTGACAAACTTGCTCAAGCTGGTCTAAAGATCTGGGTATTGACTGGGGATAAGATGGAAACTGCAATCAACATTGGATTTGCTTGTAGTTTACTTCGACAGGGCATGAGGCAAATCTGTATCACAATGAATTCAGATTCAGCAACCAATGATGCGAAAGAGGTAATCAAAGGAAACATCTTGAATCAAATCACCAATGCCTCGCAAATGATAAAGCTAGAAAAGGATCCACATGCTGCATTTGCATTAATTATTGATGGGAAAACTCTAACGTATGCTTTAGAAGATGATGTCAAACTCCAATTTTTGGGACTGGCTGTTGGCTGTGCGTCTGTTATTTGTTGTCGTGTGTCTCCAAAGCAAAAAGCACTGGTTACAAGGCTGGTGAAAGAAGGAACTGGGAAGACCACTTTGGCCATTGGTGATGGTGCAAATGATGTTGGCATGATTCAAGAAGCTGACATTGGTGTTGGAATCAGTGGGGTTGAAGGTATGCAGAAGCATATACCATTTGTTGAAGTTGTGGAACTCAAGGTTTTTAATTCTTTTCAGGCAGTAATGGCCAGTGACTTTTCTATTGCCCAATTCCGGTTTTTGGAGCGGCTTCTGGTAGTCCATGGACACTGGTGTTACAAGAGAATTGCACAAATGGCCTTTGCGGGCTTCTCTGGACAATCGGTTTATGATGACTGGTACATGATATTGTTCAATGTTGTTCTTACATCATTGCCTGTCATTTCTCTTGGAGTTTTTGAACAAGATGTTCCATCAGAAGTTTGTTTACAGTTTCCTGCACTGTATCAGCAAGGACCCAAAAACTTGTTCTTTGACTGGTATAGAATCTTGGGATGGATGGGGAATGGTCTTTATTCCTCCCTCGTGATCTTCTTTCTTGTCATTATCATCTTCTATGACCAAGCATTCCGTCCCAATGGCCAGGTCGCAGACATGGCTGCTGTTGGTACCACGATGTTCACTTGCATCATCTGGACTGTCAATTGCCAGATTGCACTGACAATGAGCCATTTCACATGGATTCAACACCTCTTTGTGTGGGGCAGCATAACCACTTGGTACCTCTTTCTCTTGTTATACGGCATGCTTCCACCAAAACATAGCAAATCTGCCTACCAAATATTGGTGGAGGTTCTTGCTCCTGCTCCTATTTATTGGACAACAACCCTATTAGTTACAATTACATGCGTTCTTCCATATCTCGCCCACATATCCTTCCAAAGATGTGCTCATCCCATGGATCACCACATTATCCAAGAAATCAAATACTACAAGAAGGACATTGAAGATCAGCACATGTGGACGAGGGAGCGGTCTAAAGCAAGGCAAGAAACGAAGATTGGATTCACGGCAAGAGTGGAAGCAAAGATTAGGCATTTTAGAAGTAAGTTGCAGAAGAAGCAGCAGCAGCAGTCTTCAGTGGGGTCTTCAGTGGGGTCTTTGTCCCCATTATGA | 3741 | 0.4218 | MTRGRIRARLRRRSHLYTFGCLKPTTTEELPYSLQGPGYSRTVFCNQPQLHEKNSLFYCKNVISTTKYNVITFLPKALFEQFRRVANIYFLLAACLSASPISPFSALSMVAPLAFVVGLSMVKEALEDSRRFFQDVKVNRRKVCLHIGNGTFGLRSWQKIVVGDVVKVEKDQFFPADLLLLASSYEDGICYVETMNLDGETNLKVKRSLEATLSLDHDEAFKDFSGTIYCEDPNPNLYTFIGNFEHENQVYPLDPSQILLRDSKLRNTDHVYGVVIFTGHDSKVMQNSTKSPSKRSTIEKKMDYIIYTLFTVLILISFISSIGFVAKTKYQAPTWWYLRPDNIEYQFDPEKIGLAGMSHLITALILYGYLIPISLYVSIEVVKVLQATFIDQDIQMYDDETGTPAEARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSIAGTAYGVRSSEVELAAAKQMASDLEEPDMDMSNFSIPEESKVPWENITVDEESELGNVANSKNDEDQRTSIKGFGFEDDRLMNGNWMKEPNADVLLLFFRILAICHTAIPELNEETDNCTYEAESPDEGAFLVAAREFGFEFYRRTQSSVVIRERFAASGQVVQREYKILNLLDFTSKRKRMSVIVRDEEGNIILFCKGADSIIFDRLSKNGKMYLDATTRHLNEYGEAGLRTLALAYRELDDLEYSVWNSKFQKAKTAIGPDREAMLDQVSDVMERELILVGATAVEDKLQKGSKYLLASLFASTFCSPQVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMRQICITMNSDSATNDAKEVIKGNILNQITNASQMIKLEKDPHAAFALIIDGKTLTYALEDDVKLQFLGLAVGCASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGVGISGVEGMQKHIPFVEVVELKVFNSFQAVMASDFSIAQFRFLERLLVVHGHWCYKRIAQMAFAGFSGQSVYDDWYMILFNVVLTSLPVISLGVFEQDVPSEVCLQFPALYQQGPKNLFFDWYRILGWMGNGLYSSLVIFFLVIIIFYDQAFRPNGQVADMAAVGTTMFTCIIWTVNCQIALTMSHFTWIQHLFVWGSITTWYLFLLLYGMLPPKHSKSAYQILVEVLAPAPIYWTTTLLVTITCVLPYLAHISFQRCAHPMDHHIIQEIKYYKKDIEDQHMWTRERSKARQETKIGFTARVEAKIRHFRSKLQKKQQQQSSVGSSVGSLSPL | 1246 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vimu4g00356 | 1246 | PANTHER | PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE | 42 | 1217 | - | - | |
| Vimu4g00356 | 1246 | SUPERFAMILY | HAD-like | 418 | 928 | IPR036412 | - | |
| Vimu4g00356 | 1246 | Gene3D | - | 112 | 289 | - | - | |
| Vimu4g00356 | 1246 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 54 | 1166 | IPR023298 | - | |
| Vimu4g00356 | 1246 | SFLD | Haloacid Dehalogenase | 405 | 966 | - | - | |
| Vimu4g00356 | 1246 | Pfam | Phospholipid-translocating ATPase N-terminal | 43 | 109 | IPR032631 | - | |
| Vimu4g00356 | 1246 | FunFam | Phospholipid-transporting ATPase | 119 | 289 | - | - | |
| Vimu4g00356 | 1246 | FunFam | Phospholipid-transporting ATPase | 591 | 722 | - | - | |
| Vimu4g00356 | 1246 | Gene3D | - | 729 | 932 | IPR023214 | - | |
| Vimu4g00356 | 1246 | SFLD | p-type atpase | 405 | 966 | IPR044492 | - |
Showing 1 to 10 of 25 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vimu4g00356 | K01530 | - | gmx:100778710 | 2120.51 |
Showing 1 to 1 of 1 entries
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Vimu4g00356 | 4 | 2547887 | 2553748 | Vimu11g02990 | 11 | 49528834 | 49534788 | PCT |
Showing 1 to 1 of 1 entries