LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vimu4g00340	ATGAGAATCAGGAGGGACAGTTTCATAACCCACAGAGCCTTCTGTGATGCATTAGCAGAGGAGAGTGCAAGATCTGTGACAGGCATGGACATTGGCATAGGCATTCCCAGCAACTCAGCTACAACGCCAACGACACCTCACAAAGCACCTGCAGCAGGAGTAGTGATCCCTTCATCCTCTCATCATCATCATCATGAAGACATCCATGGTAGCAATTACCCATTGAAGAAAGAGCAACAAGGTTTCATGCCCCCTTGGCTTGGACAACCACCCTCCACCATTGATCTCTCCTCCTCCTCCTCCTCATTCTTCTCTCAGCAGGATCATGTGAGCAGTCTCCTTGAAAACCCTAACCCTAGAGCTGGTGGTGGTGGCGGTGGTCCCTCTCTCCCTCCCTACCCAACAGCACCTTCCCCTCCTCACATGTCAGCCACAGCGTTGCTGCAGAAAGCAGCCCAAATGGGAGCTACCATGAGCAAAACTGGCTCCATGATTAGGACCCACCAACAGGCTCACGTGTCTGCTGACCCTTTGAATTTGTCCTCACGTGACGACCAGATGACCCCCACTTCCAACACCACCACTCCCCATGGCTTGGTACCTTTCGGGAATAAAGCTGTTCCTGGTGTTGGTGTTGGTGTTTCTTCATCACTCCTTCACCATGTTATTAACTCTTTCTCTTCCCCTTTTGAAGGGACTTCTTTTGAGGACCCTTTCAATGGTGCTGTCACGAAAACAACCGCCGCCGATGACCGTGCCGGTGGTGGTGGCGGCAGCGGAGGAGGAGGAGGAAATTATAATGAGGCCATGACCAGAGATTTCTTGGGTCTTAGACCCCTCTCTCACACTGATATTCTCAACATTGCTGGCATGGGAAACTGCATGAACTCCCAACATAACCAAACCCAAAACCCTTGGCAAGGTTAG	927	0.5124	MRIRRDSFITHRAFCDALAEESARSVTGMDIGIGIPSNSATTPTTPHKAPAAGVVIPSSSHHHHHEDIHGSNYPLKKEQQGFMPPWLGQPPSTIDLSSSSSSFFSQQDHVSSLLENPNPRAGGGGGGPSLPPYPTAPSPPHMSATALLQKAAQMGATMSKTGSMIRTHQQAHVSADPLNLSSRDDQMTPTSNTTTPHGLVPFGNKAVPGVGVGVSSSLLHHVINSFSSPFEGTSFEDPFNGAVTKTTAADDRAGGGGGSGGGGGNYNEAMTRDFLGLRPLSHTDILNIAGMGNCMNSQHNQTQNPWQG	308

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vimu4g00340	308	PANTHER	SERINE/THREONINE-PROTEIN KINASE RIO	4	297	IPR031140	-
	Vimu4g00340	308	MobiDBLite	consensus disorder prediction	150	199	-	-
	Vimu4g00340	308	MobiDBLite	consensus disorder prediction	91	114	-	-
	Vimu4g00340	308	MobiDBLite	consensus disorder prediction	59	73	-	-
	Vimu4g00340	308	MobiDBLite	consensus disorder prediction	58	200	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vimu4g00340	Vimu-Chr4	2453882	2454808	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vimu4g00340	4	297	IDZ Gene Family	AT1G55110	31.333	1.51e-15	75.1

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vimu4g00340	K25870		-	gmx:100820609	310.071