Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g00291 ATGAATATCAATAGCACAAAAGGACTTCTTGCACTCTTTGCATTTGTCTTCTTGGCATGGGGTAATGCACAAAATACCCTTGTGCCAGCAATCATAACATTTGGTGACTCAGCCGTGGATGTTGGGAATAATGATTATTTGCCTACCCTTTTCAAGGCAAACTACCTTCCTTATGGAAGAGACTTTGTCAACCATCAACCCACTGGGAGGTTCTGCAATGGGAAACTAGCCACTGATATTACTGCTGAAACGCTGGGTTTTAAGAGTTTTGCACCTGCATATCTTAGCCCCCAGGCTTCAGGGAAGAATCTTCTCATTGGAGCAAACTTTGCTTCAGCAGCCTCTGGTTATGATGAAAAGGCTGCTATTTTGAACCATGCGGTTCCACTGTCTCAACAGTTAAAATATTTCAAGGAATATCAAGGCAAGCTGGCCAAGGTTGCTGGCAGTAAAAAAGCAGCGCTTATTATTAAGGATGCGCTGTACATATTGAGCGCTGGCAGTAGTGATTTTGTTCAAAACTATTACGTCAATCCTATAATCAGCAAAGCCTTCACTCCTGATCAGTATTCTGCATACCTTGTTGGTGCATTTTCACTCTTTGTTAAGGACTTGTATAAATTCGGAGCTAGGAAGGTTGGAGTGACTTCACTCCCACCTCTAGGTTGCCTACCAGCTGCAAGAACCTTGTTTGGTTTCCACGAGAATGGTTGTGTCTCGAAGATCAACAATGATGCCCAAGGATTTAACAACAAAATCAAGACAGCCGCAGCAAATCTCCAAAAGCAACTTCCTGGTCTCAAGATTGTTGTCTTTGATATTTTCAAACCTCTTTATGACCTTGTTCAATCCCCTTCAAAATTTGGTTTTGCCGAGGCAAGGAAAGGTTGCTGTGGTACTGGAATAGTGGAGACAACATCTTTATTGTGCAATCCAAAATCACCAGGAACTTGTTCTAATGCAACCCAGTATGTGTTTTGGGATAGCGTCCATCCTTCACAAGCTGCTAACCAAGTTCTAGCCGATGCATTGATTTTACAAGGCATTGCCCTTATCACTTAA 1062 0.4237 MNINSTKGLLALFAFVFLAWGNAQNTLVPAIITFGDSAVDVGNNDYLPTLFKANYLPYGRDFVNHQPTGRFCNGKLATDITAETLGFKSFAPAYLSPQASGKNLLIGANFASAASGYDEKAAILNHAVPLSQQLKYFKEYQGKLAKVAGSKKAALIIKDALYILSAGSSDFVQNYYVNPIISKAFTPDQYSAYLVGAFSLFVKDLYKFGARKVGVTSLPPLGCLPAARTLFGFHENGCVSKINNDAQGFNNKIKTAAANLQKQLPGLKIVVFDIFKPLYDLVQSPSKFGFAEARKGCCGTGIVETTSLLCNPKSPGTCSNATQYVFWDSVHPSQAANQVLADALILQGIALIT 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g00291 353 Gene3D SGNH hydrolase 21 348 IPR036514 -
Vimu4g00291 353 PANTHER GDSL ESTERASE/LIPASE EXL3 15 344 - -
Vimu4g00291 353 FunFam GDSL esterase/lipase APG 20 349 - -
Vimu4g00291 353 SUPERFAMILY SGNH hydrolase 123 344 - -
Vimu4g00291 353 CDD SGNH_plant_lipase_like 29 345 IPR035669 -
Vimu4g00291 353 Pfam GDSL-like Lipase/Acylhydrolase 31 343 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g00291 Vimu-Chr4 2024519 2026225 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu4g00291 9 345 Pollen Coat Proteome AT1G75910 34.412 2.06e-63 203
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g00291 - - gmx:100795716 664.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g00291 4 2024519 2026225 Vimu4g00291 4 2024519 2026225 ECH
Vimu4g00291 4 2024519 2026225 Vimu11g02906 11 48900380 48901949 PCT