Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g00262 ATGAACACTGCCACACAAAAACAGCAAAACACAACCATGGCATCCCTTTCGATCGTCCTATGTTCTTGTCTCATCATTTTCATGGCTGCCACGAACACTTCTGTTCAAGCTTCCATTCAATTCCAAGTTGGTGGCAGCCTCGGCTGGCATGAACCTGACCCCAACAATACTGAATTTTATAGCCAATGGGCTCAAAGGAACAGGTTTCAAGTTGGTGATGCTCTTGTTTTTGAGTACCAGAATGACTCAGTTCTCAGTGTGGAGAAATTGGATTACATGAATTGTGATGCAAGTAACCCCATCACAGCTTTTGACAATGGTAAGAGCACTTTTATTCTTGACAGGCCTGGGGACTTCTACTTCATCAGTGGAACCGATGAACACTGCAAGAATGGGCAAAGATTAGTTGTGGATGTGATTCATGAACATCATTTTACATCTCCGCCACCCATTTCTCTTCCACCACAAGGCTTTCCACCAATGGCTTCTCCACCTGATCAAAGCTTTGAGGATTCAACATCTGCCTCAGTGATGATTACTGCAACTTCTATGTCTGTTTTTGTCACGTTTGTTATTGTGCTGCTGTTAGCACCTTGA 597 0.4355 MNTATQKQQNTTMASLSIVLCSCLIIFMAATNTSVQASIQFQVGGSLGWHEPDPNNTEFYSQWAQRNRFQVGDALVFEYQNDSVLSVEKLDYMNCDASNPITAFDNGKSTFILDRPGDFYFISGTDEHCKNGQRLVVDVIHEHHFTSPPPISLPPQGFPPMASPPDQSFEDSTSASVMITATSMSVFVTFVIVLLLAP 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g00262 198 FunFam Early nodulin-like protein 1 38 144 - -
Vimu4g00262 198 PANTHER BLUE COPPER PROTEIN 35 170 IPR039391 GO:0009055
Vimu4g00262 198 Gene3D - 39 148 IPR008972 -
Vimu4g00262 198 Pfam Plastocyanin-like domain 56 133 IPR003245 GO:0009055
Vimu4g00262 198 ProSiteProfiles Phytocyanin domain profile. 39 141 IPR003245 GO:0009055
Vimu4g00262 198 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 23 - -
Vimu4g00262 198 SUPERFAMILY Cupredoxins 39 140 IPR008972 -
Vimu4g00262 198 CDD OsENODL1_like 40 140 IPR041846 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g00262 Vimu-Chr4 1793243 1794052 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu4g00262 14 150 Phytocyanin Superfamily AT1G79800 46.809 5.43e-44 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g00262 - - gmx:100783893 268.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g00262 4 1793243 1794052 Vimu4g00262 4 1793243 1794052 ECH