Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g00214 ATGTTATACTTCCGTGGTCCTTACTTGGCTCTTGCTATCAAAACTGGCATTATCACTGGAATCTTATCTTTGACTGAAGGAATTGCAGTAGGTAGAACATTTGCATCACTTAAGAACTACCAGGTCGATGGAAACAAAGAAATGATGGCTATTGGTCTAATGAACGTAGCTGGCTCTTGTTCTTCATGTTATGTCACAACAGGATCTTTTTCTAGATCCGCTGTTAACTACAATGCCGGAGCACAGACAACAGTTTCAAATATAATCATGGCTGCGGCTGTTCTAGTTACCCTTCTGTTTCTCATGCCTCTCTTCTACTATACACCAAATGTTGTCTTAGCAGCCATTATCATCACTGCTGTGATTGGGCTATTAGATTATCAATCTGCGTATAAACTGTGGAAGGTTGACAAACTTGATTTCTTGGCATGTCTGTGTTCCTTTTTCGGGGTTCTGTTTATTTCAGTGCCTCTAGGCCTTGCTATAGCGGATACTGAGCTTGTGTTGGCAAATCCTGTTGGAAATGTGGCGGAAAAATTGCACAAGTCAAAAATTTTGGAATCCTTTGGATTAAAAGGAGTGTATCTCACAGTGGGAGAAGCTGTGGCTGACATTTCATCGATCTGGAAAGCTCAACCTTGA 642 0.4112 MLYFRGPYLALAIKTGIITGILSLTEGIAVGRTFASLKNYQVDGNKEMMAIGLMNVAGSCSSCYVTTGSFSRSAVNYNAGAQTTVSNIIMAAAVLVTLLFLMPLFYYTPNVVLAAIIITAVIGLLDYQSAYKLWKVDKLDFLACLCSFFGVLFISVPLGLAIADTELVLANPVGNVAEKLHKSKILESFGLKGVYLTVGEAVADISSIWKAQP 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g00214 213 PANTHER SULFATE TRANSPORTER 4 163 IPR001902 GO:0016020|GO:0055085
Vimu4g00214 213 Pfam Sulfate permease family 8 145 IPR011547 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g00214 Vimu-Chr4 1499154 1507777 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu4g00214 166 213 Inorganic Solute Cotransporters AT3G15990 74.000 3.98e-17 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g00214 K17471 - gmx:100815251 310.071
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g00214 4 1499154 1507777 Vimu4g00214 4 1499154 1507777 ECH
Vimu4g00214 4 1499154 1507777 Vimu11g02825 11 48329417 48333330 PCT