Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g00100 ATGGTGAAGTTGGTTGTGAAAGCTGGGAGCAGACCTCCATGGGTGGGTCTTGCATCTGCAGTTTGGATTCAAATAGCAGTTGGAAATCCATTCAACTTTCCTCTCTATTCTTCTGCCCTCAAATCTGTTTTGTCTCTCAACCAGCAACAGGTCACTATTCTCGGAGTGGCCAATGATGTTGGGGAGAGCATGGCTCTGCTTCCAGGCATTGCCTCCAACAACTTCCCTCCTTGGGCTTTCCTTCTCCTTGGTTCTCTCCTTTGTTTCTTTGGTTATGGCCTTATCTTCCTTACTGTTACACAAACTGTTTCCCAACTCCCTTATATCCTGGTAGTTCCTCATTCCATTCCACACACATACGTGGGTTTTCTCACACATTTGATATGCCTTGCCCTATGTGTTGCCGCTAACAGCAGTGCATGGTTTGGAACAGCTGTGTTTGTCACCAACATGAGAAACTTTCCTCTCAATAGAGGCACCATCTCTGGCATTCTTAATGGTTATGGAGGAATTAGTGCTGAAGTATACACCTTAATATATAGCTTGGTGCTGAAAGGGTCTGCTTCTAAATTGCTTTTGTTCCTTACTGTTGGACTTCCTGCTGTATGTTTATTAATGATGTTCTTCATTCGGCCTTGCACTCCTTCTGGTGAAGACTCTTCAGTGCATGTGCATTTTATTTTTGTCCAAGCTGCAAGTGTTTTACTTGCCTCCTATCTTGTTGTCACCACAATTGTGAGTGACGTGGTCTCTATAAATGATGCTGTAACCTACTTCTTGGTTGCCATAATGGTTTTACTTCTGATAGCTCCCCTTGCAATTCCTATAAAAATGACACTATTTCCTTCTAATTCCAAGTGCAACGTTTCACTGGTTGGTTCTTCAGATAATTTGGCATCGGAGAGTGACATTTCAACGCAGACAAGTCCATTGCTAACACCATCTTCCTCAGCTGCTATTCTTGAAAGTTTTCATGAAAGGGGTGATGTCTCGGATGTTGAGATGCTCATTGCAGAAGGACAGGGAGCAGTGATGCAGAAAAGGAGACCTAAGAGGGGAGATGATTTCAAGTTTTGTGAAGCTTTCATCAAAGCAGACTTCTGGCTTTGCTGGTTTGCTTATTTTCTTGGGGCTGGCTCAGGAGTAACGGTTCTCAATAATTTGGCTCAAATTGGAGTTGCCTTAGGTGTAGAAGATACAACCATATTATTGTCAGTCTTCAGCTTCTGCATATTTATTGGCCGCCTTGGCGCTGGTGTTATTTCTGAATACTTTGTCAGGTTGATAGCACTACCCCGAACATTTTGGATGGCATGTGCACAAATAATCATGATCGTAGCATTTTTATTTTATGCTTCTGCTCTGAACGGCACTCTTTATGCTGCAACTGCTCTACTTGGTATCTGCTACGGGGTTCAATGTTCTATAATGGCTCCAACTGTCTCAGAGATTTTTGGTCTGAAACACTTTGGTGTTATTAGTAGCTTCATGATGCTAGGCAATCCAATTGGTGCTCTTATTTTCTCTGTTTTTCTTGCGGGCAACGTGTACGATACAGAAGCTGCAAAGCAAGGAAACTCCACCTGCTATGGTGCAGATTGCTTCAGGTTGACTTTTCTGGTTTTGGCTGGTGTCTGTGGACTTGGTACCATCTTGAGTATTATTTTGACAATTAGAATGCGACCAGTATATAAAATGTTGTATGCTGGAGGTTCATTTCGTCTATCTCAGAATTCAGGTCACTGA 1746 0.4273 MVKLVVKAGSRPPWVGLASAVWIQIAVGNPFNFPLYSSALKSVLSLNQQQVTILGVANDVGESMALLPGIASNNFPPWAFLLLGSLLCFFGYGLIFLTVTQTVSQLPYILVVPHSIPHTYVGFLTHLICLALCVAANSSAWFGTAVFVTNMRNFPLNRGTISGILNGYGGISAEVYTLIYSLVLKGSASKLLLFLTVGLPAVCLLMMFFIRPCTPSGEDSSVHVHFIFVQAASVLLASYLVVTTIVSDVVSINDAVTYFLVAIMVLLLIAPLAIPIKMTLFPSNSKCNVSLVGSSDNLASESDISTQTSPLLTPSSSAAILESFHERGDVSDVEMLIAEGQGAVMQKRRPKRGDDFKFCEAFIKADFWLCWFAYFLGAGSGVTVLNNLAQIGVALGVEDTTILLSVFSFCIFIGRLGAGVISEYFVRLIALPRTFWMACAQIIMIVAFLFYASALNGTLYAATALLGICYGVQCSIMAPTVSEIFGLKHFGVISSFMMLGNPIGALIFSVFLAGNVYDTEAAKQGNSTCYGADCFRLTFLVLAGVCGLGTILSIILTIRMRPVYKMLYAGGSFRLSQNSGH 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g00100 581 SUPERFAMILY MFS general substrate transporter 252 562 IPR036259 -
Vimu4g00100 581 Gene3D MFS general substrate transporter like domains 364 565 IPR036259 -
Vimu4g00100 581 Pfam Nodulin-like 13 276 IPR010658 -
Vimu4g00100 581 SUPERFAMILY MFS general substrate transporter 12 214 IPR036259 -
Vimu4g00100 581 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 14 565 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g00100 Vimu-Chr4 605009 607610 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu4g00100 1 581 Nodulin-like Gene Family AT1G80530 58.834 0.0 680
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g00100 - - psat:127087605 813.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g00100 4 605009 607610 Vimu4g00100 4 605009 607610 ECH