Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g00074 ATGCTGATCAACGTCAAGGAATCCACCATGGTGCGCCCGGCGGAGGAGACGCCGCGGACGCCGCTGTGGAATTCCAACGTCGATTTGGTGGTGCCAAACTTCCACACGCCCAGCGTCTATTTCTATAGGCCAAACGGGGCCTCCAATTTCTTCGACACAACCGTTATGAAGGAGGCTCTCAGTAAGGCCCTCGTCCCTTTCTACCCCATGGCCGCCCGCCTCCGCCGCGACGACGACGGTCGCGTCGAGCTTTTTTGCGACGGTCAGGGAGTGCTCTTCGTCGAGGCTGACACCACCGCCGCCATCGATGACTTTGGCGACTTCTCACCCACCCTTGAGCTCCGGCAGCTCATCCCCGCCGTGGATTATTCTGCCGGGATCGAAACTTATCCGCTCTTAGTGCTTCAGGTAACATATTTCAAATGTGGAGGAGTGTCATTAGGTGTTGGTATGCAACACCATGTAGCAGATGGAGCATCGGGTCTTCACTTCATCAATTCGTGGTCCGATGTTGCTCGAGGTTTGGATATTTCCCTCCCTCCGTTCATCGACAGGACACTGCTCCGTGCTCGGGATCCACCTCGTCCTGTTTTTGATCACATTGAATACAAGCCTGCACCAACCATGAAGACGAACCTGCAACCCCAAAAACCAGGCTCTGATGACCCTGCCACTGCCGTCTCCACTTTCAAACTCACCCGTGACCAACTCAACAGCCTCAAGGCTAAGTCCAGAGAAGATGGCAACTCCATCAGCTATAGCTCTTATGAGATGCTGGCCGGTCATGTATGGAGAAGTGTCTGCAAGGCAAGAGCACTCCCTCATGACCAAGAAACCAAATTGTATATTGCAACTGATGGAAGGTCAAGGCTTCAACCTCCCCTTCCCAATGGTTACTTTGGCAATGTCATCTTCACCACCACTCCTGTAGCAGTGGCCGGCGATCTCATGTCAAAACCAACATGGTATGCTGCCAGCAGAATCCACGATGCGTTAATTCGAATGGACAACGAATATTTGAGATCAGCTCTTGACTATCTAGAGCTACAGCCTGATCTAAAAGCGCTTGTTCGTGGATCACACACTTTTAGGTGTCCCAACCTCGGCATCACTAGCTGGGTAAGGCTTCCAATCCATGATGCTGACTTTGGGTGGGGAAGACCCATTTTCATGGGACCTGGTGGGATTGCCTACGAGGGGCTTTCTTTCATTATTCCCAGCTCTACAAATGACGGCAGCATGTCTGTGGCAATAGCTCTTCCTCCTGACCGAATGAAAGTGTTTCAGGATTTGTTTTATGACTTTTGA 1308 0.5183 MLINVKESTMVRPAEETPRTPLWNSNVDLVVPNFHTPSVYFYRPNGASNFFDTTVMKEALSKALVPFYPMAARLRRDDDGRVELFCDGQGVLFVEADTTAAIDDFGDFSPTLELRQLIPAVDYSAGIETYPLLVLQVTYFKCGGVSLGVGMQHHVADGASGLHFINSWSDVARGLDISLPPFIDRTLLRARDPPRPVFDHIEYKPAPTMKTNLQPQKPGSDDPATAVSTFKLTRDQLNSLKAKSREDGNSISYSSYEMLAGHVWRSVCKARALPHDQETKLYIATDGRSRLQPPLPNGYFGNVIFTTTPVAVAGDLMSKPTWYAASRIHDALIRMDNEYLRSALDYLELQPDLKALVRGSHTFRCPNLGITSWVRLPIHDADFGWGRPIFMGPGGIAYEGLSFIIPSSTNDGSMSVAIALPPDRMKVFQDLFYDF 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g00074 435 Gene3D - 216 435 IPR023213 -
Vimu4g00074 435 Gene3D - 1 205 IPR023213 -
Vimu4g00074 435 FunFam Spermidine hydroxycinnamoyl transferase 1 203 - -
Vimu4g00074 435 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 8 432 - -
Vimu4g00074 435 Pfam Transferase family 3 433 - -
Vimu4g00074 435 FunFam Tryptamine hydroxycinnamoyl transferase 211 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g00074 Vimu-Chr4 405014 407542 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu4g00074 1 434 Monolignol Biosynthesis Gene Families AT5G48930 77.189 0.0 712
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g00074 K13065 - gmx:100801923 804.668