Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g00073 ATGGCAGATCTCAAGGAGAGGCTGCTACCACCAAAACCTGCTTCGGCTCTTAATGTAAGAGAGGTTGCCAATCGACCATCTGCCTCTGGAAGGCAATCTTTCCAAGGGGTGGATGTTCTGGGGTTAAAGAAGCGAGGCCAAGGTCTCCGATCATGGATTCGTGTTGACACATCTGGAAACTCTCAGGCCATTGAAGTAGACAAGTTTACCATGATGCGACGTTGTGATCTACCTGCTCGTGATCTTCGCCTACTTGATCCCTTGTTTGTCTACCCATCAACAATCCTTGGCAGGGAAAAAGCTATTGTTGTAAATCTGGAGCAGATACGGTGTATCATTACGGCAGATGAAGTTCTTCTCTTGAATTCCCTTGATAGTTATGTATTGCACTATGTAATGGAGCTACAACGACGGTTGACGGCAACTGGGGTCGGGGAGGTTTGGCCATCAGAGGGTTCTGACATGAACCGAAGGAGGGGAAGTAGGAATTTTGATAATGTATTTAACAACTCTTCCCCTGATTATTTACCTTTCGAATTCAGGGCCCTTGAAGTTGCCCTGGAGGCGGCATGCACATTTCTTGATTCTCAGGTTCGTAGAAGTACATGTTTATGTCAGAGACTATCAAATTCTGATTTTTTTTTTAATTTAAATTATTCTTCATTTCTTTTTTTGGTTGCAATGAACAGAGATCTTGTATTTCTATAG 708 0.4336 MADLKERLLPPKPASALNVREVANRPSASGRQSFQGVDVLGLKKRGQGLRSWIRVDTSGNSQAIEVDKFTMMRRCDLPARDLRLLDPLFVYPSTILGREKAIVVNLEQIRCIITADEVLLLNSLDSYVLHYVMELQRRLTATGVGEVWPSEGSDMNRRRGSRNFDNVFNNSSPDYLPFEFRALEVALEAACTFLDSQVRRSTCLCQRLSNSDFFFNLNYSSFLFLVAMNRDLVFL 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g00073 235 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 21 205 IPR039204 -
Vimu4g00073 235 Gene3D Magnesium transport protein CorA, transmembrane region 130 211 - -
Vimu4g00073 235 Gene3D - 39 123 - -
Vimu4g00073 235 FunFam Magnesium transporter MRS2-1 40 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g00073 Vimu-Chr4 394143 400211 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu4g00073 1 197 MRS2 Gene Family AT1G80900 80.808 4.25e-111 324
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g00073 K16075 - gmx:100801387 361.688