Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g00060 ATGATTAAAGTGAAGGAGTCGACAATGGTGCAACCTGCGGAGGCGACACCGCGGAAGGTGTTGTGGAACTCAGATCTGGATTTGCTGGTGGGGAATTACCACACTCCCAGTGTTTATTTCTACAACCCAAACGGAGCTTCCAATTTCTTCCATTCCAACATCTTGAAAGAAGCTCTAAGTAAGACCCTCGTCCTTTTCTACCCAATGGCCGCCCGTCTCCGCCACGGTCACGACCACCGCGTCGAGATTTATTGTAACGGTCAAGGTGTACTTTTCGTTGAGGCTCATGCCACCGTTGCCATGGACCACTTCACTCAAAACCTTCACCATCGCAACCTTATCCCCACGGTGGATTATTCCGCCGGGATTGAAACATATCCGATAGTGATAACATATTTCAAATGTGGAGGGGTGTCATTGGGTGTCGGTCTGCAACACCACGTAGTAGATGGAGCATCGGGGATTCACTTCATCAATGCATGGTCCGATGTGGCTCGTGGCTTCGGCATTTCCGTTCCTCCGTTCATTGACAAGACCCTACTTCGTGCCAGGGACCCACCTCAACCTGCTTTTCCTCACCACGAATACCAGCTCTCACCACCCACCACCACCTCCACCGCGACCACCACCACCACCACTGTAGTTGCCTCTATCTTAAAATTGACTCGTCACCAACTCAACACCCTCAAGGGTAAGTGGAAAGAAGGTGGCAACAGCATCAAGTATAGCACTTATGAGATGTTGGCAGCTCATATATGGATAAGTGTGTGCAAAGCAAGATGCCTTGGTGATGAGCAAGAAACCAGACTGTATATTCCGATTGATGGAAGGTGGAGGCTGCAACCTCCCCTTACTCCTGGTTACTTTGGCAATGTCATTTTCTCCACCATTCCCGTCGCAGTGGTAGAAGAACTCGTGTCAAAACCTACATGGTATGCTGCAGACAAATATCATAAAGCAATAATGAGAATGGACAACGAATATTTGAGGTCAGCTGTTGACTATCTAGAGCTACAACCTGATCTGAATGGTCTTGTTCGTGGGGCACATACTTTTGCTTGTCCAAATGTTGGTATCAATAGCTGGGTCAAGTTTCGGATCTATGATGCTGACTTTGGTTGGGGAAGACCCATCTTCATGAGACCTGGTTGGATTATACACGAGGGGCTATCAATCATAACTCCAACATCAACGAATGATGGCAGCTTATACTTGACAATTGCTCTACCACCTCACCATATGAACTTGTTTCAACTATTCTTTTTTGACATTTGA 1275 0.4729 MIKVKESTMVQPAEATPRKVLWNSDLDLLVGNYHTPSVYFYNPNGASNFFHSNILKEALSKTLVLFYPMAARLRHGHDHRVEIYCNGQGVLFVEAHATVAMDHFTQNLHHRNLIPTVDYSAGIETYPIVITYFKCGGVSLGVGLQHHVVDGASGIHFINAWSDVARGFGISVPPFIDKTLLRARDPPQPAFPHHEYQLSPPTTTSTATTTTTTVVASILKLTRHQLNTLKGKWKEGGNSIKYSTYEMLAAHIWISVCKARCLGDEQETRLYIPIDGRWRLQPPLTPGYFGNVIFSTIPVAVVEELVSKPTWYAADKYHKAIMRMDNEYLRSAVDYLELQPDLNGLVRGAHTFACPNVGINSWVKFRIYDADFGWGRPIFMRPGWIIHEGLSIITPTSTNDGSLYLTIALPPHHMNLFQLFFFDI 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g00060 424 Gene3D - 197 422 IPR023213 -
Vimu4g00060 424 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 7 418 - -
Vimu4g00060 424 Pfam Transferase family 1 418 - -
Vimu4g00060 424 Gene3D - 1 196 IPR023213 -
Vimu4g00060 424 FunFam Tryptamine hydroxycinnamoyl transferase 200 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g00060 Vimu-Chr4 321842 323249 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu4g00060 2 424 Monolignol Biosynthesis Gene Families AT5G48930 60.508 0.0 540
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g00060 K13065 - gmx:100801923 582.022
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g00060 4 321842 323249 Vimu11g02705 11 47536703 47538784 PCT