Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g03708 ATGGAGAACGACACCGCCGCCGCCGCTAACAATAACACCGCCACTGCGAAAGTAGGTTCCGGAGGAGTGAAATCGAACAATCATAACCTAGAGGAAGAGCATTCCAATTTGAATGGCGAGGAGCACATGGCAGAGCAAGTGGAGGCGGAAGAGGAAGAAGATCGAGAAGCCGATGTAGGTGAAGGAGAACCAACTGGATCTGCGCCCAACCCTCGCCAACCTACGCGAACCCCTTTCACTAATCTCAGCCAGGTCGATGCTGACCTTGCTCTTGCTCGAACCCTCCAGGAGCAGGAAAGGGCATATATGATGCTGCGAATGAATAATGATGGAAGTGATTATGGTAGTTGGGAAGGTGAAAGCTATTTACATGATGATGGAGATGATTTTGATGATCTACATGATGGTACTGACGTGGATGAGGACGAGGACGATGATGACGAGGATGACGATGAAGATGATGATAATGAGGAGTATGAAGATGAAGATGCATTTGATGTCCATGCTAGTGCTGGAGAACATGATAATCCCATCATTGAATTTGACCCAGATGTTTATTCAAGCGATGAAGCATATGCTAGAGCATTACAGGAAGCTGAAGAGAGGGAGATGGCAGCTAGATTGTTGGCTCTTGCTGGGATAAATGATCGGGAGGTAGAGGAGGTAGAGGAACATGGTGCTAATTCTCAGTCTATGGTTCCTTGGAATATAATACCTGTTGGTGGAAATTTGCTTTAG 738 0.4675 MENDTAAAANNNTATAKVGSGGVKSNNHNLEEEHSNLNGEEHMAEQVEAEEEEDREADVGEGEPTGSAPNPRQPTRTPFTNLSQVDADLALARTLQEQERAYMMLRMNNDGSDYGSWEGESYLHDDGDDFDDLHDGTDVDEDEDDDDEDDDEDDDNEEYEDEDAFDVHASAGEHDNPIIEFDPDVYSSDEAYARALQEAEEREMAARLLALAGINDREVEEVEEHGANSQSMVPWNIIPVGGNLL 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g03708 245 MobiDBLite consensus disorder prediction 1 26 - -
Vimu3g03708 245 MobiDBLite consensus disorder prediction 131 164 - -
Vimu3g03708 245 MobiDBLite consensus disorder prediction 1 84 - -
Vimu3g03708 245 MobiDBLite consensus disorder prediction 45 59 - -
Vimu3g03708 245 MobiDBLite consensus disorder prediction 108 183 - -
Vimu3g03708 245 MobiDBLite consensus disorder prediction 68 84 - -
Vimu3g03708 245 Coils Coil 30 50 - -
Vimu3g03708 245 PANTHER E3 UBIQUITIN LIGASE BIG BROTHER-RELATED 31 232 IPR043312 -
Vimu3g03708 245 MobiDBLite consensus disorder prediction 165 180 - -
Vimu3g03708 245 MobiDBLite consensus disorder prediction 27 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g03708 Vimu-Chr3 49546191 49547795 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g03708 65 230 C3H Transcription Factor Family AT3G19910 45.946 1.06e-38 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g03708 K19045 - gmx:100306465 272.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g03708 3 49546191 49547795 Vimu3g03708 3 49546191 49547795 ECH