Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g03706 ATGGGGAATGTTGATGTGGTGAGGAATATATCATCATGTTTGTTCCCCCTGTTCTGGGAGGCTGTTGAATTCCTCTATATATTGGAGAAAACAGCCGTCATCACACCATTCTTCAAAAACTTTACAAACAACAAAGTACGTCAAATAAATTTCATGATGTTGACGCATTGCCGTGAACTGTGCAAGCCAGTCTCCATCATGATTCTAGTTAACTTGGCTCTGGCTTTTGTCAATTTGCTTCTGAAGAAGGTTCTTAATGAAGGAATGGATTACATGTCCATTATAACATATCGACAGGCAATTTCGTTTATCTTCATGGCACCTATTGCCTGCATCTATGAAAGGCAAGAACCAAATTCATTTCTCGTAATAATTCTACTTAGAGGAGAAAAAAAAGTTATTGTTGAATTCTTCATTCTCTGTCACCTTAAACACATCTTTGGAAAAACTGGTTTTTTCTTTTACAGGAAACACAAAGTGGAAGTTCGCATAATATTTCTGCTTTTCCTCAGTGCCCTACTCGGAGTAACAGTTCCACAAAACCTATTCCTTCTCGGACTTGATTATACGTCAGCTACGTTCTCGTGTGCGTTCCTCAACATGGTGCCTGTATTTACGTTCATTATGGCAGTGCCATTTGGGATAGAGAAGGTGAATGTGCAAAGCAAGGGTGGCAAAGCTAAAGTCATGGGAACTTTTGTGTGCATTGGTGGAGCCTTGTTGTTGGTCCTTTATAAAGGTATGCCCCTTATCAAGCCACAATCTCAATACATAGCTGACAAAGTTACAAGTGTACCTTCAACTGCCAAGTTAGAAACGTGGATTATAGGTTCCATAATTCTGACTGGACTGGTAGGGTCGGGCTTGTGCTATGTGGCAATGTCATGGTGTGTCAAACAAAGTGGTCCAGTTTTCACCGCCGCTTTTACCCCCCTTATACAGATATTTGTGGCCATCCTTGATTTCTCTGTACTAAAGGAAGAAATTTATCTGGGAAGTGTTGCAGGATCTGCGTTGGTCATTGCTGGTATGTATATTCTTCTGTGGGGAAAAAGCAAAGAGCAAGGACAAGATGTTCAGAAGGATACGCAAACAAATCAAGATGTAGAACGTCAATAG 1119 0.4057 MGNVDVVRNISSCLFPLFWEAVEFLYILEKTAVITPFFKNFTNNKVRQINFMMLTHCRELCKPVSIMILVNLALAFVNLLLKKVLNEGMDYMSIITYRQAISFIFMAPIACIYERQEPNSFLVIILLRGEKKVIVEFFILCHLKHIFGKTGFFFYRKHKVEVRIIFLLFLSALLGVTVPQNLFLLGLDYTSATFSCAFLNMVPVFTFIMAVPFGIEKVNVQSKGGKAKVMGTFVCIGGALLLVLYKGMPLIKPQSQYIADKVTSVPSTAKLETWIIGSIILTGLVGSGLCYVAMSWCVKQSGPVFTAAFTPLIQIFVAILDFSVLKEEIYLGSVAGSALVIAGMYILLWGKSKEQGQDVQKDTQTNQDVERQ 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g03706 372 PANTHER WAT1-RELATED PROTEIN 273 361 IPR030184 GO:0016020|GO:0022857
Vimu3g03706 372 Pfam EamA-like transporter family 154 243 IPR000620 GO:0016020
Vimu3g03706 372 Pfam EamA-like transporter family 276 348 IPR000620 GO:0016020
Vimu3g03706 372 SUPERFAMILY Multidrug resistance efflux transporter EmrE 272 353 - -
Vimu3g03706 372 SUPERFAMILY Multidrug resistance efflux transporter EmrE 156 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g03706 Vimu-Chr3 49529154 49531157 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g03706 59 281 Nodulin-like Gene Family AT3G30340 35.426 6.37e-39 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g03706 - - vun:114189567 399.823