Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g03632 ATGGAGCTTTCTGCCTTCCCCACCTTCAAAGCAGTTTCTAATGCTTCCTTAATTCCATTTTCTTCTAATCAACTCTGCAGCCGCTGCTCCTTTCCTTTTCGTCGCAGCGATTATGGCTTCTGTTGGATTCCCGAGCCAAAACCGTTTGTTCGGATCAAGATGTGTTCGGAGAAAAAATGTTCGTCGTCGAACGGTCACGCTGGAACCGGAACCGAAAACGGAGAAACGAAACCTGATTTCGTCGAAGTCATAGGCATTGGTTCTAGGAAGGACGCTATTTTTGATTTCTGTTTGAGCGCGCCGTTTCAGTTGCCTTTGCTGCGGTTTTGGAATATCCTTATGACAGAATCAGAAAAAGTGCATTTACAACAAAGATCAATTGAAGAAGAACCTCATCCAAGAGTTGTCAAAGCTCCCGTATTTTTGAAGTCATGCTCACAGACTATTGTGGCCAGTGCAGGATATGGCTTGTACCACACTGTTGCAGCTGATATTTTTGAAACTGTAAGGTCCAGGAATGGATTAACAGTGGCTATAGTTTTGAAGCCATTTAGATTTGAAGGGCTTAGACGCCAAAACGAGGTGAAGGCCTTGGAGCAGAAACTTAAGGAGAACACAAACTTACTTATTGAAATTGATATTGATGCACTGCTTGAGAAAGACTTGTTGACACTAGATGAGGCCATGAAGACTGCTAATGATGCAATGTTAGAATCCTATAAAGAAGCAGGAATTGGATTTGGAGCCGCTGCAAACATAAAAGCTTCAATTTTGCAGTCTATATTTGATAGTCCTTTCCTGGGTGCTCGTTTGAAGGATCCAAATAGCATAGTTATATGCACTCTGGCCTCTTCAGGACCCATCGATGATAGTGATATAGAAATCTTTCTACGTACTTTCCGTCAAACAACAAATTACACAAATGATATTATAATATCAGCAATACATGACCCTACCGTTGAGCCCAACCTACTAATAACGACAGTGCTTACACTTGGCTGTTTAAATGTGCAACGGTCTTCCCAGAATGGTGGTATACTATCCAGACTTGCCATGCATTTTCCTCTTATTTTTAGCTTTTGGGGAAGACATAGTCAGCAACAAGTTGGCACTGGGAAACAGGCTGAAGTATTTCCGCCAGAAATGATGAGTTCTGATGATGTTGATGAAAGGACAAATCAGATCGCTTTAGATGGCATAGATAGCAATCTTGATAAAAACTGTGAGGAGTTGGAGCCAACAATGAGCAAGAACTCCAAGTTTCCTGCTTCAAGGGATTCAGGAAAAAGTGAAGATTTATTTGACACCTCTTCCAACTATAACATCCTCTATGACTCTATTACTGAAGGAGGTGACTCTGCTTTTCAAAGGGAGCAACTTGAGAACTGGAATCTAGGTCCCGGATTTGAGGTGGCAAAGAAATGGGCCCAGGAAAAAGCTGCTGATGCTACACCAATTGTTGATAATCTAAGCATCTTCCACCTTCCTGTTGGCGTGAGGCCTTCAGAAGAGTTGAAAGAAAGACTAGAAATCTCATTTATGACAAAACAGCATGAGCCTGATACCGATAATGTTGTGAAAGCACAAACATTTAATGGAGGTACGTCTTCTTGGAGTGCAGCGACTGATGGTAGCTTGGAAGCAGTTATGGATTTTGCATCTTCACTTTTGAAAGGAAAGAATGCTAATAAATCAAAGACACATGGAGTACTATCTGTTCGTGCTGCGTCTATGTTGGAGGCAGAACGTGATTTCTCAAAAAAGTGGAGTCCAGTGGTGGAAATGCAATATAGGGGAGGAAGATACAAGGGACGATGCCAAGGAGGTCTACCTGAAGGAAAGGGGCGCCTTGTTCTCAGAGATGGGAGCATATATGATGGCTTATGGCGGTATGGTAAGAGATCAGGTCCGGGTACATTTTATTTCAAAAACGGAGATATGTTTCAAGGATTATGGAGAGATGATGTCATACACGGCAAGGGTTGGTTTTATTTTCACACTGGTGATCGGTGGTTTGCAAACTTTTGGAAGGGAAAAGCTAATGGTGAGGGACGATTCTACACAAAGTCCGGCGATGCCTTCTTTGGCAATTTCAAAGATGGGTGGCGACATGGCCAGTTTCTCTGTATTAATGCAAACGGGACAAGGTTGGTTGCTCTCTCTTTCAGTTATTGTGAAGTTTCGGAATATAAATGTTCAATGGACCTGAGCTTCAATTTGATAACAAAGGGCCTTCATAAAGACATAAATTAA 2253 0.4208 MELSAFPTFKAVSNASLIPFSSNQLCSRCSFPFRRSDYGFCWIPEPKPFVRIKMCSEKKCSSSNGHAGTGTENGETKPDFVEVIGIGSRKDAIFDFCLSAPFQLPLLRFWNILMTESEKVHLQQRSIEEEPHPRVVKAPVFLKSCSQTIVASAGYGLYHTVAADIFETVRSRNGLTVAIVLKPFRFEGLRRQNEVKALEQKLKENTNLLIEIDIDALLEKDLLTLDEAMKTANDAMLESYKEAGIGFGAAANIKASILQSIFDSPFLGARLKDPNSIVICTLASSGPIDDSDIEIFLRTFRQTTNYTNDIIISAIHDPTVEPNLLITTVLTLGCLNVQRSSQNGGILSRLAMHFPLIFSFWGRHSQQQVGTGKQAEVFPPEMMSSDDVDERTNQIALDGIDSNLDKNCEELEPTMSKNSKFPASRDSGKSEDLFDTSSNYNILYDSITEGGDSAFQREQLENWNLGPGFEVAKKWAQEKAADATPIVDNLSIFHLPVGVRPSEELKERLEISFMTKQHEPDTDNVVKAQTFNGGTSSWSAATDGSLEAVMDFASSLLKGKNANKSKTHGVLSVRAASMLEAERDFSKKWSPVVEMQYRGGRYKGRCQGGLPEGKGRLVLRDGSIYDGLWRYGKRSGPGTFYFKNGDMFQGLWRDDVIHGKGWFYFHTGDRWFANFWKGKANGEGRFYTKSGDAFFGNFKDGWRHGQFLCINANGTRLVALSFSYCEVSEYKCSMDLSFNLITKGLHKDIN 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g03632 750 SUPERFAMILY Tubulin nucleotide-binding domain-like 83 238 IPR036525 -
Vimu3g03632 750 Gene3D - 604 653 - -
Vimu3g03632 750 Gene3D - 654 715 - -
Vimu3g03632 750 Pfam MORN repeat 607 623 IPR003409 -
Vimu3g03632 750 Pfam MORN repeat 648 670 IPR003409 -
Vimu3g03632 750 Pfam MORN repeat 625 647 IPR003409 -
Vimu3g03632 750 Pfam MORN repeat 695 706 IPR003409 -
Vimu3g03632 750 SMART morn 623 644 IPR003409 -
Vimu3g03632 750 SMART morn 646 667 IPR003409 -
Vimu3g03632 750 SMART morn 692 713 IPR003409 -
Vimu3g03632 750 SMART morn 600 621 IPR003409 -
Vimu3g03632 750 MobiDBLite consensus disorder prediction 413 432 - -
Vimu3g03632 750 PANTHER RADIAL SPOKE HEAD 1 HOMOLOG 114 717 - -
Vimu3g03632 750 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 599 717 - -
Vimu3g03632 750 Gene3D Tubulin/FtsZ, GTPase domain 145 332 IPR036525 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g03632 1 716 PP2C-type Phosphatase Gene Family AT1G75010 42.338 0.0 535
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g03632 - - gsj:114371951 1175.61