Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g03602 ATGGGAAAGAAAGCTCTCAAACTTCCCTCTCTTTTCAAAACCAAAGAACCACCAAGAAATCATCATCCATGGCAATTCATACCCTCTTGCGGCCATTCCAAGACCCTCTCTTTCCGAGGTGGTGCCGACGATGACATCTTCAAGACTGTTAACTCCGTCTTCTTCGACCCTTCAGAGAGTGTCATCGAAACTCCCAAGTCATGGTTCACCACCTCGTCTGAATCTGCCAGCATCTCGACCGAGTCAGAAGACTACTACTGCTGCGACGGGGAGTCTCTGGAGATGTTGGTGCGTGGTGTGAGATCAGAGAGGCTTTTCTTCGAGCCTGGTGACACAAGCTCCATCTTGGAAAAGGCCAAGGCCAGTGGGTTTCCCTTCAAAGAAAGTGTGGTTCTTGCCATGGAATCAGAGGACCCTTACGAGGATTTCAAGAGATCAATGGAGGAGATGGTGGAATCTCATGGAGTAAGGGACTGGGAGGGCTTGGAGGAGCTTTTGACTTGGTATCTCAAGGTCAATGGCAGGAACAATCACGGATTCATAGTCGGTGCTTTTGTTGATTTGCTCTTTAGTTTAGCAGCTTCTAACAATTCTAACTCTTGTTCTGATTCAACTGCATATTCTTCTGCTATTTCTTCTTTTGCTTCTTCCCCCTTGTGTCATGAGATTGTCGAGCATGGCATTGGAAATGATGATGCTGTAACATCTTAG 711 0.4684 MGKKALKLPSLFKTKEPPRNHHPWQFIPSCGHSKTLSFRGGADDDIFKTVNSVFFDPSESVIETPKSWFTTSSESASISTESEDYYCCDGESLEMLVRGVRSERLFFEPGDTSSILEKAKASGFPFKESVVLAMESEDPYEDFKRSMEEMVESHGVRDWEGLEELLTWYLKVNGRNNHGFIVGAFVDLLFSLAASNNSNSCSDSTAYSSAISSFASSPLCHEIVEHGIGNDDAVTS 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g03602 236 MobiDBLite consensus disorder prediction 1 20 - -
Vimu3g03602 236 ProSiteProfiles OVATE domain profile. 132 191 IPR006458 -
Vimu3g03602 236 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 71 193 IPR038933 GO:0045892
Vimu3g03602 236 Pfam Transcriptional repressor, ovate 136 192 IPR006458 -
Vimu3g03602 236 NCBIfam uncharacterized plant-specific domain TIGR01568 130 193 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g03602 Vimu-Chr3 48774292 48775032 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Vimu3g03602 Ovate 4.6e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g03602 - - vun:114190765 411.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02301 6 20110597 20111385 Vimu3g03602 3 48774292 48775032 ECH
Vimu3g00155 3 1282196 1282882 Vimu3g03602 3 48774292 48775032 ECH
Vimu3g03602 3 48774292 48775032 Vimu3g03602 3 48774292 48775032 ECH