Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g03597 ATGGCAGTTGCAGTGGGAGATATGGTTAACACCAATGGCCTCCTCGTCCAAGTCATCACCGGAAGGTGGTTCGTGGTCTTCGCCTCCTTCCTTATCATGGCCGCCGCCGGCGCCACCTACATGTTCAGTCTATACTCCGGCGACATCAAATACGCCCTGGCCTACGACCAAACAACCCTCAACCTCCTCAGTTTCTTCAAAGACCTGGGGGGCAATGTCGGTGTGCTCTCCGGCCTCATAAACGAGATTACTCCCCCGTGGGTGGTCCTGGCCATGGGTTCCCTCCTCAACTTCTTCGGCTACTTCATGATATGGCTGGCGGTAACAAAAAGAATACCCAGACCGCAAGTGTGGCAGATGTGCCTCTACATCTGCATCGGCGCCAACTCTCAGTCCTTCGCCAACACTGGTTCCCTCGTGACCTGCGTCAAGAACTTCCCCGAAAGCCGCGGTGTTGTGTTGGGCATCCTCAAAGGCTACGTGGGTCTGAGTGGAGCCATCATCACGCAGCTCTACTACGCCTTCTACTTCGACGACTCAAGGTCCTTGATTTTGCTCATAGCCTGGCTCCCAGCGGCTATCTCCTTCGCTTTCCTTCGTACCATTCGCTACATGAAACCCGTTCGACAACCCAACGAGCTTAGTGTCTTCTACAAGTTCTTGTATATCTCACTGGCTCTCGCTGGCTTCCTGTTGCTCATGATCATAGTTCAGAAAAAATTATCCTTCTCGCAAAGTGAGTATGGCGCAAGTGCCGGGGTTGTGCTTCTCCTGCTCTTCCTCCCTCTTGCTGTTGTTTTTGTTGAACAACGAAAAATCAGGGAGACTCAGAAGCTAGCATTCATTGACCCATCCCCAGTGAAGATATCAGCTGAAAGAGAGCTACCGAAATCGGCAAACGGTGACTCTAACCCGGTTTTGGGTCCGATTTCAAAGACCGAAGAGACCAGATGGTGGCAAAAAGTCTTTAGTCCACCGGCTAGAGGTGAGGACTATACTATACTTCAAGCACTATTCAGCTGGGACATGATACTTCTATTCGTAGCCGGCACGTGCGGTGTTGGGGGAACTTTGACCGCCATTGATAATCTTGGTCAGATTGGGAGCTCGCTAGGGTACTCCAAGGCCAGCATAAGCACGTTTGTGTCGTTGGTTAGCATTTGGAATTATATGGGTCGGGTTTTTTCTGGATTTGTCTCGGAACATTTTCTGCAACAGTACAAGTTCCCTCGACCACTGATGCTCACGCTGACCCTGCTCTTATCCTGCGTGGGTCACCTTCTGATAGCCTTCGACGTGCCCAACGGACTCTACGTTTCATCGGTGGTCATCGGGTTCTGCTTTGGCGCGCAATGGCCTCTGGTGTTCGCCATAATTTCGGAGCTGTTTGGGCTCAAGTACTATTCAACGTTGTACAACTTTGGCGGTGCAGCGAGCCCAATTGGGCTCTACCTTCTGAACGTGAGGGTGACCGGGCACCTGTATGACAAGGAGGGTCTGAGGCAACTTGCAGCGGCGGGGAAACCAAGAATTGTTGGCCAGGAATTGACTTGTACTGGGGGCAGTTGTTTCAAGTTGTCTTTCATCATTATCACTGCAGCCACCGTTTTCGGTGCCATAATTTCACTGATCTTGGTGGCTAGGACTATTGAGTTCTACAAAGGTGATATATACAAGAGGTACCGTGACCAAGCTGAGGAAAACACAACAACCGCCACGACCACCGAGATGAAGGTGGTCGCAAGCGGCGGTGAGAAAAGACAAGAAGCCGTGGTGGAGTAA 1782 0.514 MAVAVGDMVNTNGLLVQVITGRWFVVFASFLIMAAAGATYMFSLYSGDIKYALAYDQTTLNLLSFFKDLGGNVGVLSGLINEITPPWVVLAMGSLLNFFGYFMIWLAVTKRIPRPQVWQMCLYICIGANSQSFANTGSLVTCVKNFPESRGVVLGILKGYVGLSGAIITQLYYAFYFDDSRSLILLIAWLPAAISFAFLRTIRYMKPVRQPNELSVFYKFLYISLALAGFLLLMIIVQKKLSFSQSEYGASAGVVLLLLFLPLAVVFVEQRKIRETQKLAFIDPSPVKISAERELPKSANGDSNPVLGPISKTEETRWWQKVFSPPARGEDYTILQALFSWDMILLFVAGTCGVGGTLTAIDNLGQIGSSLGYSKASISTFVSLVSIWNYMGRVFSGFVSEHFLQQYKFPRPLMLTLTLLLSCVGHLLIAFDVPNGLYVSSVVIGFCFGAQWPLVFAIISELFGLKYYSTLYNFGGAASPIGLYLLNVRVTGHLYDKEGLRQLAAAGKPRIVGQELTCTGGSCFKLSFIIITAATVFGAIISLILVARTIEFYKGDIYKRYRDQAEENTTTATTTEMKVVASGGEKRQEAVVE 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g03597 593 Pfam Nodulin-like 22 267 IPR010658 -
Vimu3g03597 593 SUPERFAMILY MFS general substrate transporter 22 549 IPR036259 -
Vimu3g03597 593 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 23 558 - -
Vimu3g03597 593 CDD MFS_Mch1p_like 21 539 - -
Vimu3g03597 593 Gene3D MFS general substrate transporter like domains 334 553 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g03597 Vimu-Chr3 48717033 48720088 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g03597 14 564 Nodulin-like Gene Family AT2G39210 68.412 0.0 791
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g03597 - - gmx:100808975 971.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g03597 3 48717033 48720088 Vimu3g03597 3 48717033 48720088 ECH