Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g03595 ATGGCGATAGGTGCAGCTTCCATGGGTGTGAATGGATGGGGAGACATGAAGAGTCTCACCGTCCAGGTCATCACCGGTCGATGGTTCGTCGTCTTTGCCTCCTTTCTAATCATGGCTGCTGCCGGAGCCACCTACATGTTCGGTCTCTACTCCGGAGACATCAAAGCCACCCTTGGCTACGACCAAACCACTCTCAATCTCCTAAGTTTCTTCAAGGACTTTGGTAGCAACGTCGGAGTCCTCTCTGGTCTTATCAACGAGCTCACTCCACCTTGGGTGGTCCTCGCCATCGGTGCCGTCCTAAACTTCTTTGGCTACTTCATGATATGGCTTTCCGTCACTAAGAGAATAGCCAGACCCCAAGTGTGGCAGATGTGTCTCTACATCTGCATAGGTGCTAACTCTCAGTCCTTCGCAAACACCGGTTCCCTAGTCACCTGTGTCAAGAACTTCCCTGAAAGTCGTGGTGCTGTGTTGGGCATTCTCAAAGGCTATGTCGGTCTCAGTGGTGCAATCATCACACAATTGTACTATGCTATTTACTATGACGACACAAAGGCTTTGATTTTGCTCATAGGTTGGCTCCCAGCTGCTATTTCCTTTGCTTTCCTTCGAACCATTCGCTACATGAAGCCAGTTAGGCAGTCCAATGAGCTCAAGGTTTTCTACAACTTTCTGTATATTTCTCTTGGCCTTGCTGGGTTTCTTTTGGTCATGATTACTATACAAAAAAGGGCCGACTTTACTCAGAGTGAGTATGGTGTGAGCGCCGCTATTGTGGTTTTCTTGCTCTTCCTCCCACTTCTTGTCGTTTCTATAGAAGAACATAAGATCTGGCACAGTAAAAGACTTGCTTTGGTTGACCCCTCGCCCGTGAAAATAGTGACTGAGGGTGAAAAAGTGAAACAGAATGAGACTACTAATGGGAACACTTCAGTTACAGCGATATCCAACGACACCAAGTGGTGGGAAAATGTTTTTAGTCCTCCAGAAAGAGGTGAGGACTACACGATACTTCAAGCGCTATTCAGCGCCGACATGTTAATACTTTTCATAACTTGCATATGCGGTGTTGGTGGAACGCTCACTGCAATAGACAATTTGAATCAGATAGGATCCTCTCTTAGATACCCAAAGAAAAGTATAAGCACTTTCGTGTCCCTAGTGAGCATTTGGAACTACATGGGAAGGGTTTTCTCTGGATTTGTTTCTGAACATTTTCTACACAAGTACAAGTTTCCCCGTCCTCTCATGCTTTCTTTAACTCTGCTCTTATCATGTGTTGGTCACCTTCTGATAGCATTTGATGTGCCAAATGGACTTTATGCTGCTTCGGTGATCATCGGGTTTTGTTTTGGAGCTCAGTGGCCTTTACTTTTTGCCATTATATCAGAGCTTTTCGGACTAAAATATTATGCAACTTTGTACAACTTTGGAAGCGTAGCAAGTCCATTAGGGTTATACGTGCTTAATGTGAAAATGACTGGGTATTTGTATGACAAAGAAGCCAAGAAGCAACTGGCAGCGTTGGGGCTTGAGAGAAAGGAAGGCCAGCAATTGAACTGTATAGGGGTGGACTGCTTCAAGTTATCCTTCATTATTATCACAGCTGCAACTTTCTTTGGTGCCATTGTTTCACTGATTTTGGTGGCTAGGACGAGAAAGTTTTACAGTGGTGACATATACAAGAGATTCCAGGATGCAGCCACGGTGTCAGAAACTGAAATGGCAGGGTTAGAGAACACCAGCAAACCAGAGAAAGATGCCAAAAGTATGGTGCCAACTCAGAAGTAG 1794 0.4515 MAIGAASMGVNGWGDMKSLTVQVITGRWFVVFASFLIMAAAGATYMFGLYSGDIKATLGYDQTTLNLLSFFKDFGSNVGVLSGLINELTPPWVVLAIGAVLNFFGYFMIWLSVTKRIARPQVWQMCLYICIGANSQSFANTGSLVTCVKNFPESRGAVLGILKGYVGLSGAIITQLYYAIYYDDTKALILLIGWLPAAISFAFLRTIRYMKPVRQSNELKVFYNFLYISLGLAGFLLVMITIQKRADFTQSEYGVSAAIVVFLLFLPLLVVSIEEHKIWHSKRLALVDPSPVKIVTEGEKVKQNETTNGNTSVTAISNDTKWWENVFSPPERGEDYTILQALFSADMLILFITCICGVGGTLTAIDNLNQIGSSLRYPKKSISTFVSLVSIWNYMGRVFSGFVSEHFLHKYKFPRPLMLSLTLLLSCVGHLLIAFDVPNGLYAASVIIGFCFGAQWPLLFAIISELFGLKYYATLYNFGSVASPLGLYVLNVKMTGYLYDKEAKKQLAALGLERKEGQQLNCIGVDCFKLSFIIITAATFFGAIVSLILVARTRKFYSGDIYKRFQDAATVSETEMAGLENTSKPEKDAKSMVPTQK 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g03595 597 FunFam Nodulin family protein 338 559 - -
Vimu3g03595 597 MobiDBLite consensus disorder prediction 576 597 - -
Vimu3g03595 597 CDD MFS_Mch1p_like 26 543 - -
Vimu3g03595 597 SUPERFAMILY MFS general substrate transporter 27 555 IPR036259 -
Vimu3g03595 597 Pfam Nodulin-like 27 271 IPR010658 -
Vimu3g03595 597 Gene3D MFS general substrate transporter like domains 335 557 IPR036259 -
Vimu3g03595 597 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 28 560 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g03595 Vimu-Chr3 48694453 48696246 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g03595 5 567 Nodulin-like Gene Family AT2G39210 72.487 0.0 845
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g03595 - - pvu:PHAVU_007G024800g 1044.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g03595 3 48694453 48696246 Vimu3g03595 3 48694453 48696246 ECH