Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g03411 TCCCAACGCTTCAAACTCGTTCTTCTCTATCGGAAGTCACTCTCAAGAACCCCTCTTCAAACCCGACAACCCAACAATCCATTACCCTCGATACTCTCTCTGAAACACTTTTCAAATGCTTCACAACAACACTCTTTCATGGTTTCCTACCTCGTAAACGACCGCGGGTTCTCCCCAGAAACCGTTCTGAAGGCTTCCAAATTCATTCAACTTGAGACCTCCGAAAAGCCCGACTCAGTCATCGCATTCTTCAGAGACAACGGATTCAGCAATACCCAAATAAACAGCATCGTCGGAAGAGCACCCAAGGTTCTCACTTGCGACCCCCACAAAAGGGTTTTTCCAAAGTTCGAGTTTTTACTCTCCAAAGGG 372 0.4677 SQRFKLVLLYRKSLSRTPLQTRQPNNPLPSILSLKHFSNASQQHSFMVSYLVNDRGFSPETVLKASKFIQLETSEKPDSVIAFFRDNGFSNTQINSIVGRAPKVLTCDPHKRVFPKFEFLLSKG 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g03411 124 Gene3D Transcription termination factor 3, mitochondrial 37 124 IPR038538 -
Vimu3g03411 124 Pfam mTERF 29 122 IPR003690 GO:0003690|GO:0006355
Vimu3g03411 124 PANTHER CGI-12 PROTEIN-RELATED 43 123 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g03411 Vimu-Chr3 47262718 47263093 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Vimu3g03411 mTERF 4.1e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g03411 K15031 - gmx:102666622 147.517