Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g03239 ATGGAGCTCCAGAGGCGCCAGGATCAGAGTCTTTCCCAGCGGAAGGGACAAAAGCGGAAGCTCGACGAGGAACAGCACGACGAGAGACAGATCTCGGCGGCGCCGTCCAGCGCCGCCGAGCGAGCGGCGCTCCTCTGCGACGTTGGAGAACAGGTGAGCATCCTCGAGTCGAGTTTCACGTGGAACGAAGCGGATCGATCCGCGGCCAAACGCGCTACTCACGCGCTCGCCGATCTCGCGAAGAATGAGGAAGTGGTGAACCTGATTGTTGAAGGAGGCGCGATTCCTGCTTTGGTGAAGCATCTTCAGGCGCCGCCTCTGATTGACCGTGTCCAGAAGCCATTGCCATTCGAGCACGAGGTTGAGAAGGGGAGCGCTTTCGCATTAGGACTCCTTGCCGTCAAGGATGGAAGGACACACATAACCAAGCTGGTATTGCTCACAATGGTGGCTTAG 456 0.5855 MELQRRQDQSLSQRKGQKRKLDEEQHDERQISAAPSSAAERAALLCDVGEQVSILESSFTWNEADRSAAKRATHALADLAKNEEVVNLIVEGGAIPALVKHLQAPPLIDRVQKPLPFEHEVEKGSAFALGLLAVKDGRTHITKLVLLTMVA 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g03239 151 MobiDBLite consensus disorder prediction 1 37 - -
Vimu3g03239 151 Gene3D - 36 145 IPR011989 -
Vimu3g03239 151 PANTHER ARM REPEAT PROTEIN INTERACTING WITH ABF2 1 138 IPR044282 -
Vimu3g03239 151 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g03239 Vimu-Chr3 46113805 46123632 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g03239 - - gmx:100784348 224.942
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g03239 3 46113805 46123632 Vimu3g03239 3 46113805 46123632 ECH
Vimu7g02224 7 19487457 19495967 Vimu3g03239 3 46113805 46123632 PCT