Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g03226 ATGGCATTGTCCTCAGAGCCATCATCATCATCACTGAAACCAATCCCAGGCAGCTATGGGATTCCCATCTTGGGAGCAATACGCGACAGACACGACTTCTTCTACCACCAAGGAAGGGACAAGTTCTTCGCCACAAGAATCCAAAAGTACAACTCCACCGTCATCCGAACCAACATGCCACCAGGTCCTTTCGTCTCCTCCAACCCTAGAGTCATAGCGCTCTTAGACGGCGCCTCCTTCCCGCTCCTCTTCGACGACAACAAGGTGGAGAAGCTCAACGTCTTTGAGGGCACCTTCATGCCTTCCATCGCCTTCACCGGTGGCCACCGCGTATGCGCCTACCTCGACACCCGAGAACCCAAACACGCCGTCCTCAAGGGCTTCTTCCTAAACGCTCTCGCAGCCCGGAAAGACGCCGTTGTGCCTCTTTTCCGTAACTGCCTCCACGAGTCCTTTTGTGAGATAGAGGACCAGTTGAACAAAAACGATGAGGCCGACTTCAACTCTGTCTTCAACCATGCCTCCTTCAATTTCTTGTTCCGCTTGCTCTGTGATAACAAGGACCCTTCACACACCATCCTCGGTTCTAAGGGACCGAAGCTGATCAGCACGTGGCTGCTTTTCCAATTGGCGCCACTTGGGACTCTTGGCCTTCCGAAAATCTTCAACTACGTAGAAGACTTTATCATTCGCACGTTTCCCCTCCCTGCGTTCTTCACCAAATCCAACTACCAAAAGCTCTACGAGGCCTTCAGAACCTCTGCGACCACACTGTTAGACGAGGCAGAGAAAGTTGGGCTCGGGCGAGACGAAGCGTGCCACAACGTGGTTTTCATGGCGTGCTTCAACTCCTACGGCGGCTTGAAGAACCAGTTCCCGATGCTGGTGAAGTGGGTGGGATTGTGCGGCGAGAAGCTTCACGCGGATCTCAGGAGCGAGATAAGGCGGGTGGTGAAGGAGGAGGGTGGGGTCACTGTGGGGGCATTGGAGAAGATGAGTCTGGTGAAATCGGTGGTTTACGAGACGATGAGAATAGAGCCTCTGGTACCCTATCAATACGGGAAAGCGAGAGAGGACTTGGTGGTGCAGAGCCACGACTCGTCGTTTAAGGTGAAGAAGGGGGAAATGTTGTTCGGGTATCAACCTTTTGCGACCAAGGATTCTAGAATCTTCAAGGATGCTGAGGTGTTCGTGCCGGGGAGGTTTGTGGGGGAGGGTGAGAAGATGTTGGCGCACGTCTTTTGGTCCAACGGTCGTGAAACGGAGGAACCAACCCCCGCTGATAAACAGTGTCCCGGGAAGAATCTGGTGGTACTGCTGTGTAGGTTGTTTCTGGCAGAGTTGTTCCTGCGTTATGATACGTTTGAATTCGAGTTTAAGGAATCTGGTTTTGGTCCCACTGTTACCATCACCTCCCTTACCAAAGCCTCCACCTTCTGA 1440 0.5292 MALSSEPSSSSLKPIPGSYGIPILGAIRDRHDFFYHQGRDKFFATRIQKYNSTVIRTNMPPGPFVSSNPRVIALLDGASFPLLFDDNKVEKLNVFEGTFMPSIAFTGGHRVCAYLDTREPKHAVLKGFFLNALAARKDAVVPLFRNCLHESFCEIEDQLNKNDEADFNSVFNHASFNFLFRLLCDNKDPSHTILGSKGPKLISTWLLFQLAPLGTLGLPKIFNYVEDFIIRTFPLPAFFTKSNYQKLYEAFRTSATTLLDEAEKVGLGRDEACHNVVFMACFNSYGGLKNQFPMLVKWVGLCGEKLHADLRSEIRRVVKEEGGVTVGALEKMSLVKSVVYETMRIEPLVPYQYGKAREDLVVQSHDSSFKVKKGEMLFGYQPFATKDSRIFKDAEVFVPGRFVGEGEKMLAHVFWSNGRETEEPTPADKQCPGKNLVVLLCRLFLAELFLRYDTFEFEFKESGFGPTVTITSLTKASTF 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g03226 479 Gene3D Cytochrome P450 6 478 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g03226 479 Pfam Cytochrome P450 308 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g03226 479 FunFam Allene oxide synthase, chloroplastic 10 478 - -
Vimu3g03226 479 CDD CYP74 45 471 - -
Vimu3g03226 479 PANTHER CYTOCHROME P450 26 14 455 - -
Vimu3g03226 479 SUPERFAMILY Cytochrome P450 10 457 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g03226 Vimu-Chr3 45998976 46001913 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g03226 12 477 Cytochrome P450 AT5G42650 51.709 8.83e-171 489
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g03226 K01723 - gmx:100801764 759.599