Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g03203 ATGCCCACCCTGTTCTCCAAACGCCTTCACCTCTGTTTCTTCAAGCTCAAATACCCCACCATTCTCCAACACCCTCACCCTCCACCTTCCACCGACAACTCCACCACCTTCACCCACCCCTCTTCTTCTTCGGACGACGACGACCGTTCCTCCTCCACGGAGCCTGACTTTGCCTCCGTCTTCGCCTCCCAGCGCTTCTTCTTCTCCTCCCCGGGCACTTCCAACTCCATCGTCGAATCCCCGGACACCCGCACCTTCGTCCCCACGGGCGGCGGCGTCACAGTCCCCAAGTATTCCCTCAACCCCTACGTCGATTTCCTCCGCTCAATGCACGAAATGATCCGTTCACGCCAAGTCGACATCACCCAAGACTGGGACTACCTCCACGAACTTCTCCTATGCTACCTCGCTCTCAACCCCTCTCACACCCACAAGTACATCATTCGCGCCTTCACCGACCTTGTCCTCCAACTCCTCTCCTCCACCCCCTGTAGGACGCACAACAGCCACCACCACCGGCGCCACCGTAGCCTGTCCGGAAACTTCCCCTAA 552 0.5888 MPTLFSKRLHLCFFKLKYPTILQHPHPPPSTDNSTTFTHPSSSSDDDDRSSSTEPDFASVFASQRFFFSSPGTSNSIVESPDTRTFVPTGGGVTVPKYSLNPYVDFLRSMHEMIRSRQVDITQDWDYLHELLLCYLALNPSHTHKYIIRAFTDLVLQLLSSTPCRTHNSHHHRRHRSLSGNFP 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g03203 183 MobiDBLite consensus disorder prediction 164 183 - -
Vimu3g03203 183 MobiDBLite consensus disorder prediction 27 41 - -
Vimu3g03203 183 NCBIfam uncharacterized plant-specific domain TIGR01568 93 160 IPR006458 -
Vimu3g03203 183 MobiDBLite consensus disorder prediction 24 55 - -
Vimu3g03203 183 MobiDBLite consensus disorder prediction 166 183 - -
Vimu3g03203 183 Pfam Transcriptional repressor, ovate 99 158 IPR006458 -
Vimu3g03203 183 ProSiteProfiles OVATE domain profile. 95 157 IPR006458 -
Vimu3g03203 183 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 39 159 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g03203 Vimu-Chr3 45799716 45802265 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Vimu3g03203 Ovate 2.2e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g03203 - - gmx:102666896 267.7