Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g03166 ATGCGCAGGCCTTCATGGAACAAATCGCAGGCGATCCAACAGGTCATTTCCCTCAAAGCGCTTCTCGAACCTTCCGACGATGATTCCCCTCCTCCTCCTACCCCCATGCACCACCAGCCTCATGCTCCTCAACCACAAGCCAATTTGACTCAACCTCCGCCCAAGGCCCCTCCTCCCGAGGAACCCGCCTTTCTCGCCGCCGACGACATTCAGAAATCTGCCTCTTCTGGGGAAAAACCTACGGAGACTAATGACACTAACACCAACGCTAACTCGGGAAATGATGCAAATGGTGGGTTTTTAGTATCCAGTGGATGTGAGGAAAAAGTGGTGGAAAAGCTGTTAGTGAGTGAGACTAGAAAAGGTTTTAGGTCATTGGATGTTTGGAATTTTCTGGGATGTATTGGAGGGTGTGCAACCAGTGGATCAATTGGCCAAATGACAATTTTCTATTGTGGTAAGGTGAACGTCTATGATGGAGTCTCACCTGATAAGGCACGGGCAATCATGCAGCTTGCTGCAAGTCCTGTCCAGTTTACTCAGGATGATCCTTTACATGGAAATGCATCAGCTTGGTCTTCTCCTTGCCACTTACCGATGGATAAGGATGTCCTCATCCCTGTTGATACAGCTATCCTTCAGGTTGCTCAAGCAGGTAGCAAGTAG 666 0.491 MRRPSWNKSQAIQQVISLKALLEPSDDDSPPPPTPMHHQPHAPQPQANLTQPPPKAPPPEEPAFLAADDIQKSASSGEKPTETNDTNTNANSGNDANGGFLVSSGCEEKVVEKLLVSETRKGFRSLDVWNFLGCIGGCATSGSIGQMTIFYCGKVNVYDGVSPDKARAIMQLAASPVQFTQDDPLHGNASAWSSPCHLPMDKDVLIPVDTAILQVAQAGSK 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g03166 221 Pfam tify domain 146 174 IPR010399 -
Vimu3g03166 221 ProSiteProfiles Tify domain profile. 140 175 IPR010399 -
Vimu3g03166 221 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 33 182 IPR040390 -
Vimu3g03166 221 MobiDBLite consensus disorder prediction 74 96 - -
Vimu3g03166 221 MobiDBLite consensus disorder prediction 1 96 - -
Vimu3g03166 221 MobiDBLite consensus disorder prediction 1 16 - -
Vimu3g03166 221 SMART tify_2 140 175 IPR010399 -
Vimu3g03166 221 MobiDBLite consensus disorder prediction 26 61 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g03166 1 27 Tify Gene Family AT4G14720 88.889 2.71e-09 54.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Vimu3g03166 tify 2.1e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g03166 - - gmx:100813937 237.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g03166 3 45404327 45410096 Vimu3g03166 3 45404327 45410096 ECH