Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g03151 ATGAAACATGGGAACCAGGATGTGGTTGATAACTTGCAGACAGCATCACTGCTTGCACTATTTGTATCAGATCATTTTGGTGGCAGTGATAGAGGTGCTATCATAGAACAGACACGGAAATCTGTGTCTGGTTCAAACTATAATAAACCTTTTATCTGTACATGCTCGGTTGGAAGCAGCACCAGTATAAGGGCTTCCACCGAACCAGTTGTAAACACCATAGATGATATTACTCTTTCTAAGACATGTGAGAAATCTCTGGACTCTATTAAAAAAAGGCGAAATTCAATCATAGTTCCAATTGGCTCTGTGCAGTATGGTGTATGCAGACACAGAGCTCTGCTTTTCAAGGTAATCGTTGATACTAAAACTGTACTATAG 381 0.399 MKHGNQDVVDNLQTASLLALFVSDHFGGSDRGAIIEQTRKSVSGSNYNKPFICTCSVGSSTSIRASTEPVVNTIDDITLSKTCEKSLDSIKKRRNSIIVPIGSVQYGVCRHRALLFKVIVDTKTVL 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g03151 126 Pfam Ethylene-responsive protein kinase Le-CTR1 76 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g03151 Vimu-Chr3 45310865 45311818 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g03151 69 121 MAP Kinase Kinase Kinase AT5G03730 46.296 9.57e-08 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g03151 - - gmx:100811118 203.371
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g03151 3 45310865 45311818 Vimu3g03151 3 45310865 45311818 ECH