Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vimu3g03145 | ATGGAAGATAATGGTCTGGCGCCGTTGTTCTATGTTGGCCACCACAAGTTGAAGCTTCTCATGTCTCCTCTTCTGCTCATGCTCTTCCTTCTCTTTCCATTTGCTTTGCCCCTCAGCGAAGAAGACATTCGACTCTGCGGTGTTTTTGTCGGGGTTTTAGATATTTACGATGCTGAATTTAGTGAAACAACCGTGGGACAAGCATTAATGGCGATGAAGGCCACTTTCAGCAATATGGCAGACGTGCTTCTTGACTGGGATGACGTCCACAATGACGACTTTTGCTCTTGGCGTGGAGTTTTCTGCGATAATGGCAGCCTTACTGTGATTTCTCTGAACTTGTCCAGCTTGAACCTCGGCGGGGAGATATCCCCAGCCATTGGTGACTTGAGAAACTTGCAGTCCATAGACTTGCAAGGGAATAAATTAACGGGGCAAATCCCAGATGAAATTGGAAACTGTGCAGCACTTTTTCTTTTGGATTTGTCTGATAATCACCTTTATGGTGATATACCTTTCTCCCTGTCAAAGCTAAAGCAACTTGAGTTTTTGAATTTAAAGAGTAATCAGTTAACTGGCCCTATCCCTTCAACTCTAACCCAAATTCCAAATCTTAAGACTCTTGATCTTGCTCGAAATAGGCTCACAGGAGAGATCCCCAGATTACTCTATTGGAATGAAGTCTTGCAGTACCTTGGGTTACGAGGAAACATGTTGAGTGGTACTCTGTCTCCTGATATATGTCAATTAACTGGATTGTGGTATTTTGATGTGAGAGGCAACAATTTGACTGGTACTATACCTGACAGCATAGGGAACTGTACAAGTTTTGAAATCTTAGACATATCATATAATCAGATTACTGGAGAGATTCCATATAATATTGGGTTTCTGCAAGTTGCCACTTTGTCACTTCAAGGGAATAGATTAACTGGGAAGATTCCAGAAGTTATTGGTTTGATGCAAGCCCTTGCAATATTGGATTTGAGTGAGAATGAGTTAGTGGGATCAATTCCCCCAATACTTGGGAATCTGACCTTCACCGGAAAGCTGTACCTTCATGGAAACATGCTTACTGGCCCGATACCTCCTGAACTAGGCAATATGTCCAAACTGAGCTACTTGCAATTGAATGACAACCACCTAATTGGAAAAATTCCAAATGAGTTTGGGAAGCTTGAACATCTTTTTGAATTGAATCTTGCCAATAATCATTTTGATGGAACTATTCCACGTAACATAAGCTCCTGCACAGCCTTAAATCAGTTTAATGTGCATGGTAATCAGTTGAGTGGTTCCATTCCATTGAGCTTCCGCAACCTTGGTAGTTTGACATACTTAAACCTCTCTGCGAACAACTTCAAGGGGACCATACCTGTTGAGTTGGGGCATATTATTAATCTAGATACATTGGATCTATCTTGCAATAATTTTTCAGGACTTGTTCCCGCATCTGTTGGTTATCTGGAACATCTCTTGACCCTCAACTTAAGTCACAACCACCTTGGAGGTTCCTTGCCAGCTGAATTTGGGAATCTCAGAAGCATTCAAATTCTTGATATGTCATTCAACAATCTCTCTGGTAGCATTCCTCCGGAAATTGGACAGCTGCAGAACCTTATGTCTTTGATTATGAACAACAATGATCTGCGAGGGAAGATTCCTGATCAGATGACTAATTGTTTTAGTCTTACACTATTAAATTTGTCCTATAACAACCTTTCCGGAGTAATTCCTTCAATGAAGAACTTTTCAAGGTTTTCAGCTGACAGCTTCTTCGGAAATTCATTATTATGTGGAGATTGGGTGGGATCAATATGTCGTCCTTACATTCCAAAATCAAGAGTGATTTTCTCCAGAGTTGCTGTAGTATGTCTCACGCTTGGAATTATGATATTGTTAGCCATGGTCATTGTAGCCTTCTATAGATCCAGCCAATCTAAACAATTGATGAAGGGATCTAGCAGAACTGGGCAAGGTCCACCAAGACTAGTTATTCTGCACATGGATATGGCTATCCACACCTTGGACGATATAATGAGAAGCACTGAGAATCTCAATGAGAAATATATCATAGGTTATGGTGCCTCTAGTACTGTATACAAATGTGTTTTGAAGAATTCCCGACCAATTGCAGTTAAGCGACTGTATAACCAACACCCACACAATTTAAGGGAGTTTGAGACCGAACTTGAGACAGTTGGTAGCATCAGACATAGAAACCTTGTCACCTTGCATGGATATGCACTCACTCCCGATGGAAATCTTCTTTTCTATGACTATATGGCCAATGGGTCATTGTGGGATCTTCTACACGATGTTTCACCTGATGCAGGTCCCTCGAAGGTAAAACTTGATTGGGAAACACGCCTGAGGATTGCTGTTGGAGCAGCCGAAGGACTGGCTTATCTCCATCATGACTGTAACCCTCGAATAGTTCACAGGGACATTAAATCTTCGAATATTTTGCTGGATGAGAACTTCGAGGCTCATCTCTCTGATTTTGGTACTGCAAAGTGCATCTCGACCTCGAGAACTCATGCATCGACCTATGTCCTTGGAACTATTGGCTATATTGACCCTGAGTATGCCCGAACATCTAGGCTGAATGAAAAATCAGATGTGTATAGCTTTGGCATAGTTCTTTTGGAACTACTGACTGGAAAGAAGGCAGTGGACAATGAGTCTAATTTGCATCAATTGATATTGGCCAAGACAGACAACAACACTGTAATGGAGGCTGTTGATGCAGAGGTGTCTATAACCTGCATTGATCTAGCTCATGTTAAGAAGACCTTTCAGCTTGCTCTTCTTTGCACGAAAAAGAACCCTTCTGATAGGCCTACCATGCATGAAGTAGCCAGGGTTCTGGTATCACTGCTTCCTTCACCTCCAAGTAAGATCCTTGCTCCACCTGCAAAGAAATTTGACTATGCCCATTTTGTGATCGAGAAGGGACAACCTCGAAAAGTTGAAGGACAACCTCACCAAGAAGATAACAACTCAACCAATGCTCAATGGTTCGTTCGCTTTGGGGATGTTATATCCAAGAGCACTTGA | 3060 | 0.419 | MEDNGLAPLFYVGHHKLKLLMSPLLLMLFLLFPFALPLSEEDIRLCGVFVGVLDIYDAEFSETTVGQALMAMKATFSNMADVLLDWDDVHNDDFCSWRGVFCDNGSLTVISLNLSSLNLGGEISPAIGDLRNLQSIDLQGNKLTGQIPDEIGNCAALFLLDLSDNHLYGDIPFSLSKLKQLEFLNLKSNQLTGPIPSTLTQIPNLKTLDLARNRLTGEIPRLLYWNEVLQYLGLRGNMLSGTLSPDICQLTGLWYFDVRGNNLTGTIPDSIGNCTSFEILDISYNQITGEIPYNIGFLQVATLSLQGNRLTGKIPEVIGLMQALAILDLSENELVGSIPPILGNLTFTGKLYLHGNMLTGPIPPELGNMSKLSYLQLNDNHLIGKIPNEFGKLEHLFELNLANNHFDGTIPRNISSCTALNQFNVHGNQLSGSIPLSFRNLGSLTYLNLSANNFKGTIPVELGHIINLDTLDLSCNNFSGLVPASVGYLEHLLTLNLSHNHLGGSLPAEFGNLRSIQILDMSFNNLSGSIPPEIGQLQNLMSLIMNNNDLRGKIPDQMTNCFSLTLLNLSYNNLSGVIPSMKNFSRFSADSFFGNSLLCGDWVGSICRPYIPKSRVIFSRVAVVCLTLGIMILLAMVIVAFYRSSQSKQLMKGSSRTGQGPPRLVILHMDMAIHTLDDIMRSTENLNEKYIIGYGASSTVYKCVLKNSRPIAVKRLYNQHPHNLREFETELETVGSIRHRNLVTLHGYALTPDGNLLFYDYMANGSLWDLLHDVSPDAGPSKVKLDWETRLRIAVGAAEGLAYLHHDCNPRIVHRDIKSSNILLDENFEAHLSDFGTAKCISTSRTHASTYVLGTIGYIDPEYARTSRLNEKSDVYSFGIVLLELLTGKKAVDNESNLHQLILAKTDNNTVMEAVDAEVSITCIDLAHVKKTFQLALLCTKKNPSDRPTMHEVARVLVSLLPSPPSKILAPPAKKFDYAHFVIEKGQPRKVEGQPHQEDNNSTNAQWFVRFGDVISKST | 1019 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vimu3g03145 | 1019 | FunFam | LRR receptor-like serine/threonine-protein kinase ERL1 | 337 | 610 | - | - | |
Vimu3g03145 | 1019 | Pfam | Leucine rich repeat | 467 | 526 | IPR001611 | GO:0005515 | |
Vimu3g03145 | 1019 | ProSiteProfiles | Protein kinase domain profile. | 686 | 961 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vimu3g03145 | 1019 | Gene3D | Ribonuclease Inhibitor | 226 | 338 | IPR032675 | - | |
Vimu3g03145 | 1019 | Pfam | Protein kinase domain | 688 | 954 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vimu3g03145 | 1019 | Gene3D | Transferase(Phosphotransferase) domain 1 | 762 | 965 | - | - | |
Vimu3g03145 | 1019 | PANTHER | RECEPTOR KINASE-LIKE PROTEIN XA21 | 500 | 585 | - | - | |
Vimu3g03145 | 1019 | ProSiteProfiles | Leucine-rich repeat profile. | 204 | 226 | IPR001611 | GO:0005515 | |
Vimu3g03145 | 1019 | FunFam | LRR receptor-like serine/threonine-protein kinase ERECTA | 657 | 761 | - | - | |
Vimu3g03145 | 1019 | ProSitePatterns | Protein kinases ATP-binding region signature. | 692 | 714 | IPR017441 | GO:0005524 | |
Vimu3g03145 | 1019 | FunFam | LRR receptor-like serine/threonine-protein kinase ERL1 | 63 | 226 | - | - | |
Vimu3g03145 | 1019 | SUPERFAMILY | Protein kinase-like (PK-like) | 664 | 957 | IPR011009 | - | |
Vimu3g03145 | 1019 | SMART | LRR_typ_2 | 441 | 465 | IPR003591 | - | |
Vimu3g03145 | 1019 | SMART | LRR_typ_2 | 489 | 512 | IPR003591 | - | |
Vimu3g03145 | 1019 | SMART | LRR_typ_2 | 369 | 392 | IPR003591 | - | |
Vimu3g03145 | 1019 | SMART | LRR_typ_2 | 178 | 201 | IPR003591 | - | |
Vimu3g03145 | 1019 | SMART | LRR_typ_2 | 250 | 274 | IPR003591 | - | |
Vimu3g03145 | 1019 | SMART | LRR_typ_2 | 393 | 417 | IPR003591 | - | |
Vimu3g03145 | 1019 | SMART | LRR_typ_2 | 513 | 537 | IPR003591 | - | |
Vimu3g03145 | 1019 | SMART | LRR_typ_2 | 130 | 154 | IPR003591 | - | |
Vimu3g03145 | 1019 | SMART | LRR_typ_2 | 202 | 226 | IPR003591 | - | |
Vimu3g03145 | 1019 | SMART | LRR_typ_2 | 321 | 345 | IPR003591 | - | |
Vimu3g03145 | 1019 | SUPERFAMILY | L domain-like | 67 | 359 | - | - | |
Vimu3g03145 | 1019 | Gene3D | Phosphorylase Kinase; domain 1 | 652 | 761 | - | - | |
Vimu3g03145 | 1019 | Gene3D | Ribonuclease Inhibitor | 339 | 609 | IPR032675 | - | |
Vimu3g03145 | 1019 | FunFam | LRR receptor-like serine/threonine-protein kinase ERECTA | 762 | 967 | - | - | |
Vimu3g03145 | 1019 | Gene3D | Ribonuclease Inhibitor | 64 | 225 | IPR032675 | - | |
Vimu3g03145 | 1019 | Pfam | Leucine rich repeat N-terminal domain | 66 | 103 | IPR013210 | - | |
Vimu3g03145 | 1019 | FunFam | LRR receptor-like serine/threonine-protein kinase ERL1 | 227 | 336 | - | - | |
Vimu3g03145 | 1019 | SUPERFAMILY | RNI-like | 267 | 582 | - | - | |
Vimu3g03145 | 1019 | SMART | serkin_6 | 686 | 958 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vimu3g03145 | 1019 | Pfam | Leucine Rich repeat | 273 | 290 | IPR001611 | GO:0005515 | |
Vimu3g03145 | 1019 | Pfam | Leucine Rich repeat | 203 | 218 | IPR001611 | GO:0005515 | |
Vimu3g03145 | 1019 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 812 | 824 | IPR008271 | GO:0004672|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vimu3g03145 | Vimu-Chr3 | 45234662 | 45242813 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vimu3g03145 | 298 | 580 | Receptor kinase-like Gene Family | AT5G07180 | 39.576 | 3.99e-45 | 174 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XIIIb | Vimu3g03145 | Pkinase | 3.9e-43 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vimu3g03145 | K20718 | - | gmx:100811653 | 1737.62 |