Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g03140 ATGAAGCTCATAGATTTTCTCTTTGCACTGAAACCAGTCTTTGCAACAGTAGGTGTTATCTCAGTTGCTGTTATTACCAAAATCCTTAGTATTAGATTTTTTGACAAGAAAAGGAAGTACCATCCGGATGACACGTGGCCAGATGGATTTAGCGTGAGGAAAGGTGATCTTGTGTCATTCCAACCTTCTTGTGGGGGCGAAGATGCCGACAAATTCAGGCCAGAGAGATTGCTCGATGAGAATGGAATTTTGAAGAAAGAAAGCCCTTTTAAGTTCACAGCCTTTCACAACTCTACAGAACTTGAGACTTACTGTGATGCTGTGACTCAGGCGGGTCCAAGAATTTGTCTGGGGAAGGAGTTTGCATACAGACAGATGAAAATATACTCTACACTCCTCTTAGGTAGTCACAGCTTCAAACTAGCAGACCAAAACAAACCAGTGAAATACAGAACCATGCTTACTCTACAAATTGAAGGTGGTCTGCACGTTTATGCTTCTCTGAAAAAGTAA 513 0.4152 MKLIDFLFALKPVFATVGVISVAVITKILSIRFFDKKRKYHPDDTWPDGFSVRKGDLVSFQPSCGGEDADKFRPERLLDENGILKKESPFKFTAFHNSTELETYCDAVTQAGPRICLGKEFAYRQMKIYSTLLLGSHSFKLADQNKPVKYRTMLTLQIEGGLHVYASLKK 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g03140 170 PRINTS E-class P450 group IV signature 50 64 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g03140 170 PRINTS E-class P450 group IV signature 116 134 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g03140 170 Pfam Cytochrome P450 44 158 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g03140 170 PANTHER CYTOCHROME P450 37 164 - -
Vimu3g03140 170 Gene3D Cytochrome P450 37 168 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu3g03140 170 SUPERFAMILY Cytochrome P450 38 166 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g03140 Vimu-Chr3 45167569 45168657 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g03140 43 166 Cytochrome P450 AT2G45510 47.328 4.19e-31 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g03140 - - pvu:PHAVU_007G063800g 187.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g03140 3 45167569 45168657 Vimu3g03140 3 45167569 45168657 ECH
Vimu8g01933 8 24983323 24985771 Vimu3g03140 3 45167569 45168657 PCT