Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g03135 ATGGGTCTCATTCTAACAATCTATCTCCTCTTGTGTATACTATCATCTGCAAATGCTGAATTTTCCAAGAAGACGTACATCATTCAAATGGATAAGTCAGCAAAGCCTGAGACCTTCTCCAATCACCTTGAATGGTATACCTCAAAAGTGAAATCAATTCTGTCCAACTCGGTAGAAGCTGAGATGGACAAGGAGGAGAGAATCATTTATACCTACCAAACTGCTTTTCATGGACTGGCTGCCAAGTTGAGCCAAGAAGAGGCTGAGAAGCTAGAGGCAGAAGATGGGGTTGTGGCTATGTTCCCGGATACCAAGTACCAACTTCACACCACGAGAAGTCCAACTTTCCTTGGGCTTGAACCAACACAAAGCACTAACGTGTGGTCAGAAAAGTTGGCCAACCATGATGTCACAGTGGGGGTTCTCGACACTGGGATTTGGCCTGAGAGTGAGAGCTTCAATGACACAGGCATGAGATCAGTACCTTCTCACTGGAAAGGTGCCTGTGAGACCGGTAGAGGCTTCGAAAAATATCACTGCAACAAGAAGATCGTGGGGGCAAGAATGTTTTACCATGGGTATGAAGCAGCAACTGGTAAAATTGATGAGAAAACAGAATACAAATCGCCAAGAGATCAAGATGGTCACGGAACTCACACTGCAGCTACAGTTGCTGGCTCCCCGGTGCATGATGCTAATCTTCTAGGCTATGCTCATGGCACAGCAAGAGGAATGGCACCAAGAGCGAGAATTGCTGCTTACAAAGTATGCTGGACTGGTGGATGCTTCAGCTCAGACATTCTTTCAGCTGTTGATACAGCTGTGGCTGATGGAGTCGATGTTCTATCCATCTCTTTGGGTGGTGGAGTCTCCTCTTACTACCGTGATAGTTTATCTGTAGCTGCTTTTGGAGCAATGGAGAAAGGTGTTTTGGTATCATGTTCTGCTGGAAATGCAGGACCTGACCCTGTTAGCCTCACAAATGTGTCACCTTGGATCACCACAGTTGGAGCCAGCACCATGGATAGAGATTTTCCAGCAGATGTTAGTCTTGGAAATGGAAGAAAGATAACCGGAACCTCGCTCTATAAAGGGAGAAGCGTGCTCTCAGTCAAGAAACAATACCCTTTAGTATACATGGGAAATAGCAACTCAAGCATACCTGATCCAAGATCTTTGTGCTTGGAAGGTACTTTGGATCGTAGAATGGTTTCGGGCAAGATCGTTATCTGTGACAGAGGCATTAGTCCAAGAGTTCAGAAGGGTCAAGTGGTGAAAAATGCAGGCGGGGTGGGAATGATTCTCACCAACACTGCAGCTAATGGAGAGGAGCTTGTTGCAGACTGTCATCTCCTTCCAGCAGTTGCAATTGGAGAGAAAGAAGGCAAGGAGCTCAAACATTATGTGTTAACAAGTAAAAAAGCTACTGCAACTCTAGCTTTTCTGGCTACAAGGTTGGGTGTTAGACCATCTCCTGTAGTGGCAGCATTTTCATCAAGAGGGCCCAATTTTCTTACCCTTGAAATTTTGAAGCCTGATGTGGTGGCTCCTGGAGTGAACATTCTTGCTGCTTGGAGTGGAGCCATTGGTCCTTCAAGTTTGCCAACAGACCACAGGAGGGTGAAGTTCAATATACTATCAGGAACTTCAATGTCATGCCCTCATGTGAGTGGAATTGCTGCTTTGCTCAAGGCTAGGCATCCAGAATGGAGTCCTGCTGCTATAAAATCTGCTTTGATGACCACAGCTTATGTCCATGACAATACCATCAAGCCTCTCAAAGATGCCTCGAGTGCTGATGCCTCAACTCCTTATGATCATGGTGCTGGACACATCAACCCCGGAAGAGCTCTTGACCCAGGTTTGGTTTATGATATTCAGCCACAGGATTACTTTGAATTCCTGTGCACTCAGAAACTAACTCCATCAGAACTCGGAGTTTTTGCCAAGTATTCAAACAGAACTTGCAGTCACTCTCTTGCAAATCCTGCGGACTTGAACTACCCAGCCATATCCGTCGTTTTTCCACAGACAAATTCCTCTTCAGTTTTGACCGTTCACAGAACTGCCACCAACGTTGGCCCTGCTGTCTCCAAGTACCATGTTGTGGTTTCACATTTCAAAGGCGCTTCTGTTAAAGTTGAGCCAAAAACCTTGAGTTTTACCAATAAATACCAGAAACTATCTTACAAAGTTACATTCACAACACAATCTCGACAAACAGAACCTGAATTTGGAGGTCTGGTATGGAAGGATGGTGTGCACAAAGAAAATGCTGGATATTATCTGCTTTCAATAATGATCTTGCGTGCTGAATTGCCAAAAGAAAAATGA 2334 0.4503 MGLILTIYLLLCILSSANAEFSKKTYIIQMDKSAKPETFSNHLEWYTSKVKSILSNSVEAEMDKEERIIYTYQTAFHGLAAKLSQEEAEKLEAEDGVVAMFPDTKYQLHTTRSPTFLGLEPTQSTNVWSEKLANHDVTVGVLDTGIWPESESFNDTGMRSVPSHWKGACETGRGFEKYHCNKKIVGARMFYHGYEAATGKIDEKTEYKSPRDQDGHGTHTAATVAGSPVHDANLLGYAHGTARGMAPRARIAAYKVCWTGGCFSSDILSAVDTAVADGVDVLSISLGGGVSSYYRDSLSVAAFGAMEKGVLVSCSAGNAGPDPVSLTNVSPWITTVGASTMDRDFPADVSLGNGRKITGTSLYKGRSVLSVKKQYPLVYMGNSNSSIPDPRSLCLEGTLDRRMVSGKIVICDRGISPRVQKGQVVKNAGGVGMILTNTAANGEELVADCHLLPAVAIGEKEGKELKHYVLTSKKATATLAFLATRLGVRPSPVVAAFSSRGPNFLTLEILKPDVVAPGVNILAAWSGAIGPSSLPTDHRRVKFNILSGTSMSCPHVSGIAALLKARHPEWSPAAIKSALMTTAYVHDNTIKPLKDASSADASTPYDHGAGHINPGRALDPGLVYDIQPQDYFEFLCTQKLTPSELGVFAKYSNRTCSHSLANPADLNYPAISVVFPQTNSSSVLTVHRTATNVGPAVSKYHVVVSHFKGASVKVEPKTLSFTNKYQKLSYKVTFTTQSRQTEPEFGGLVWKDGVHKENAGYYLLSIMILRAELPKEK 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g03135 777 Gene3D - 342 487 - -
Vimu3g03135 777 ProSiteProfiles Serine proteases, subtilase domain profile. 105 618 - -
Vimu3g03135 777 FunFam Subtilisin-like protease SBT1.5 136 355 - -
Vimu3g03135 777 Gene3D Peptidase S8/S53 domain 136 631 IPR036852 GO:0004252|GO:0006508
Vimu3g03135 777 Pfam Subtilase family 136 589 IPR000209 GO:0006508|GO:0008236
Vimu3g03135 777 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 27 756 IPR045051 -
Vimu3g03135 777 Gene3D - 635 759 - -
Vimu3g03135 777 FunFam subtilisin-like protease SBT1.5 342 486 - -
Vimu3g03135 777 ProSitePatterns Serine proteases, subtilase family, serine active site. 548 558 IPR023828 -
Vimu3g03135 777 CDD Peptidases_S8_3 106 584 IPR034197 -
Vimu3g03135 777 PRINTS Subtilisin serine protease family (S8) signature 212 225 IPR015500 -
Vimu3g03135 777 PRINTS Subtilisin serine protease family (S8) signature 547 563 IPR015500 -
Vimu3g03135 777 PRINTS Subtilisin serine protease family (S8) signature 134 153 IPR015500 -
Vimu3g03135 777 Pfam PA domain 374 465 IPR003137 -
Vimu3g03135 777 CDD PA_subtilisin_like 348 479 - -
Vimu3g03135 777 FunFam Subtilisin-like protease SBT1.9 14 109 - -
Vimu3g03135 777 Pfam Peptidase inhibitor I9 25 109 IPR010259 -
Vimu3g03135 777 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 13 109 IPR037045 -
Vimu3g03135 777 Pfam Fibronectin type-III domain 665 756 IPR041469 -
Vimu3g03135 777 SUPERFAMILY Subtilisin-like 108 622 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g03135 Vimu-Chr3 45136212 45138695 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g03135 3 756 Subtilisin-like Serine Gene Family AT5G51750 71.921 0.0 1136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g03135 - - gmx:102661592 1373.61