Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g03115 ATGATTGTTTCAGGAGGCCCCTATTGGAATGTACTAAAAGGAAGGAAAGATGGAAGAGTATCAAAGGCATCTGATGCTATCATCTTATCCTCTGCTCCAAACTTCAATGTGAGCCAACTAATTCAGAGTTTTGCCAAGAGAGGTTTGACAGTTAAAGACTTGGCAACTTTATCGAGAGGTCACACTTTAGGCTTTTCACATTGTTCTTCCTTGGAGGTATATCTTCTAAATTTTAGTTCATTACACGACACAGATCCAAGTATGAACGCTGAGTTTGCCTTAGACCTAAGAAAGAAGTGTCTAAAACCAAACCACAACCACAATGCAGGGACAGTTCCTGGACTCAACAGCAGTGTTTGA 360 0.4056 MIVSGGPYWNVLKGRKDGRVSKASDAIILSSAPNFNVSQLIQSFAKRGLTVKDLATLSRGHTLGFSHCSSLEVYLLNFSSLHDTDPSMNAEFALDLRKKCLKPNHNHNAGTVPGLNSSV 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g03115 119 Gene3D - 2 30 - -
Vimu3g03115 119 PRINTS Plant peroxidase signature 5 20 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu3g03115 119 PRINTS Plant peroxidase signature 52 64 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu3g03115 119 ProSiteProfiles Plant heme peroxidase family profile. 1 119 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu3g03115 119 Pfam Peroxidase 4 107 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu3g03115 119 SUPERFAMILY Heme-dependent peroxidases 3 109 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vimu3g03115 119 Gene3D Peroxidase, domain 2 31 111 - -
Vimu3g03115 119 PANTHER PEROXIDASE 25-RELATED 4 106 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu3g03115 119 PRINTS Haem peroxidase superfamily signature 5 17 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu3g03115 119 PRINTS Haem peroxidase superfamily signature 53 68 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g03115 Vimu-Chr3 44896911 44897270 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g03115 1 119 Peroxidase AT5G51890 62.500 1.77e-44 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g03115 K00430 - gmx:100799516 185.652