Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g03072 ATGGGGTTAGGTATACCTGCTTTTCCCTTGACGATCGTGACTCACGTTCTGGGCGTTGTTGCCACCGTTCTCGTATTGGTTTGGCTCGTCAATTTCAGGGGAGGCTTGGCTTGGGAAGATGAAAACAAGCAACTCATCTTCAATATTCATCCATTTCTTATTGTTTTTGGCCTCATAGTTCATGGAGGTGAAGCTATTATAAGTTACAAAGCTCTTCCCCTGAAGAAGGAAGTGAAGAAAGTGGTACACCTTGGTCTTCATGGAGCCGCTTTATCACTTGGAATAATTGGAATTTATACTGCCTTCAAGTTTCACAATGAAAGTGGGATTGCCAACCTATACAGTTTGCACTCGTGGCTTGGAATTGGGGTTATTGTCCTCTATGGCATTCAGTGGATATATGGGTTTGTGATCTTTTTCTACCCTGGTGGGACTCCAGATATTAGACGTTTCTCTCTTCCTTGGCATGCACTATTTGGGCTCTTTGTGTTTGTCTTGGCTGTGGGAACAGCTACTCTTGGATTTCTGGAGAAGCTCACTTTCTTGGAGAACACAGGATTGGATAAGTATGGTTCTGAGGCTTTGCTTGTGAACTTCACTGCTATCATCACAATCTTATTTGGTGTCTTCGTTGTGCTATCTGCTTTAGCTGATACTCCCGCAGCAGCAGATGACTATGAAGCAATATAA 690 0.4333 MGLGIPAFPLTIVTHVLGVVATVLVLVWLVNFRGGLAWEDENKQLIFNIHPFLIVFGLIVHGGEAIISYKALPLKKEVKKVVHLGLHGAALSLGIIGIYTAFKFHNESGIANLYSLHSWLGIGVIVLYGIQWIYGFVIFFYPGGTPDIRRFSLPWHALFGLFVFVLAVGTATLGFLEKLTFLENTGLDKYGSEALLVNFTAIITILFGVFVVLSALADTPAAADDYEAI 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g03072 229 Gene3D - 4 224 - -
Vimu3g03072 229 FunFam Cytochrome b reductase 1 5 224 - -
Vimu3g03072 229 ProSiteProfiles Cytochrome b561 domain profile. 13 216 IPR006593 -
Vimu3g03072 229 CDD Cyt_b561_ACYB-1_like 42 183 - -
Vimu3g03072 229 SMART 561_7 49 175 IPR006593 -
Vimu3g03072 229 PANTHER CYTOCHROME B561-RELATED 5 216 IPR043205 GO:0016491
Vimu3g03072 229 Pfam Eukaryotic cytochrome b561 49 181 IPR006593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g03072 Vimu-Chr3 44550624 44553376 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g03072 1 218 Chloroplast and Mitochondria Gene Families AT4G25570 66.055 9.27e-103 297
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g03072 K08360 - gmx:100527259 377.096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g03072 3 44550624 44553376 Vimu3g03072 3 44550624 44553376 ECH